RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 EPHA3P29320 983 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 MAGEA3P43357 314 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 MAGEA6P43360 314 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 ITPRIPL1Q6GPH6 555 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 GRAMD4Q6IC98 578 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 ZBTB33Q86T24 672 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 CHERPQ8IWX8 916 aaKnown RBP17.32■□□□□ 0.36
DKC1-201ENST00000369550 TDRD5Q8NAT2 981 aaKnown RBP17.32■□□□□ 0.36
DKC1-201ENST00000369550 RDM1Q8NG50 284 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 PDCD2LQ9BRP1 358 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 WDR55Q9H6Y2 383 aaPredicted RBP17.32■□□□□ 0.36
DKC1-201ENST00000369550 GPATCH2LQ9NWQ4 482 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 TUBGCP4Q9UGJ1 667 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 SQORQ9Y6N5 450 aa17.32■□□□□ 0.36
DKC1-201ENST00000369550 PRSS51A0A1B0GVH4 220 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 STX16-NPEPL1H3BU86 382 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 PSAPP07602 524 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 FUT4P22083 530 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 C15orf59Q2T9L4 293 aaPredicted RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 NCCRP1Q6ZVX7 275 aaPredicted RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 WDR49Q8IV35 697 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 ZSCAN18Q8TBC5 510 aaPredicted RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 GRIN3AQ8TCU5 1115 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 RMND5BQ96G75 393 aaPredicted RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 KLHL32Q96NJ5 620 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 TMEM79Q9BSE2 394 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 DCUN1D5Q9BTE7 237 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 LHX5Q9H2C1 402 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 WDR41Q9HAD4 459 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 PIH1D1Q9NWS0 290 aaKnown RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 BARX2Q9UMQ3 279 aaPredicted RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 WDR37Q9Y2I8 494 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 RNF11Q9Y3C5 154 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 PSAT1Q9Y617 370 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 COL2A1P02458 1487 aaPredicted RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 BCLAF3A2AJT9 711 aaKnown RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 PIK3R2O00459 728 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 CBFA2T3O75081 653 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 RNASEH2AO75792 299 aaKnown RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 ATG7O95352 703 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 AMHP03971 560 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 PRKCGP05129 697 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 MLH1P40692 756 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 PTGER2P43116 358 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 RAP1GAPP47736 663 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 SLC10A2Q12908 348 aaPredicted RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 BSPRYQ5W0U4 402 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 DPH6Q7L8W6 267 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 RP9Q8TA86 221 aaKnown RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 ADAM32Q8TC27 787 aa17.31■□□□□ 0.36
DKC1-201ENST00000369550 PRMT6Q96LA8 375 aaPredicted RBP17.31■□□□□ 0.36
DKC1-201ENST00000369550 YDJCA8MPS7 323 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 ENDOD1O94919 500 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 CSPG5O95196 566 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 STBD1O95210 358 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 CCDC130P13994 396 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 PDGFRAP16234 1089 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 TGM2P21980 687 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 AP3M2P53677 418 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 EN1Q05925 392 aaPredicted RBP17.3■□□□□ 0.36
DKC1-201ENST00000369550 CCDC60Q8IWA6 550 aaPredicted RBP17.3■□□□□ 0.36
DKC1-201ENST00000369550 SREK1Q8WXA9 508 aaKnown RBP17.3■□□□□ 0.36
DKC1-201ENST00000369550 ATXN7L3BQ96GX2 97 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 GRAP2O75791 330 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 BCAS2O75934 225 aaPredicted RBP17.3■□□□□ 0.36
DKC1-201ENST00000369550 TFPTP0C1Z6 253 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 ZNF26P17031 533 aaPredicted RBP17.3■□□□□ 0.36
DKC1-201ENST00000369550 FGFR3P22607 806 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 GLDCP23378 1020 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 ASPAP45381 313 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 ALDH3B2P48448 385 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 CCR3P51677 355 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 ZNF143P52747 638 aaPredicted RBP17.3■□□□□ 0.36
DKC1-201ENST00000369550 NDST2P52849 883 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 DUOXA2Q1HG44 320 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 MGAT5BQ3V5L5 792 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 CMC1Q7Z7K0 106 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 PQLC3Q8N755 202 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 TMEM102Q8N9M5 508 aaPredicted RBP17.3■□□□□ 0.36
DKC1-201ENST00000369550 FAM156AQ8NDB6 213 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 SLC7A3Q8WY07 619 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 RSPH1Q8WYR4 309 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 TMA16Q96EY4 203 aaKnown RBP17.3■□□□□ 0.36
DKC1-201ENST00000369550 PXMP2Q9NR77 195 aa17.3■□□□□ 0.36
DKC1-201ENST00000369550 C7orf72A4D263 438 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 GPD1P21695 349 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 TCF7P36402 384 aaPredicted RBP17.29■□□□□ 0.36
DKC1-201ENST00000369550 ESRRGP62508 458 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 STILQ15468 1287 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 INSCQ1MX18 579 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 CCDC153Q494R4 210 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 IL23RQ5VWK5 629 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 NAPRTQ6XQN6 538 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 PTAR1Q7Z6K3 402 aaPredicted RBP17.29■□□□□ 0.36
DKC1-201ENST00000369550 CLVS1Q8IUQ0 354 aaPredicted RBP17.29■□□□□ 0.36
DKC1-201ENST00000369550 BRSK2Q8IWQ3 736 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 PGAM4Q8N0Y7 254 aa17.29■□□□□ 0.36
DKC1-201ENST00000369550 CNPY3Q9BT09 278 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms