RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FBXL22Q6P050 247 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 SERPINA13PQ6UXR4 307 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 MMS22LQ6ZRQ5 1243 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 METTL3Q86U44 580 aaKnown RBP19.59■□□□□ 0.73
CKS1B-203ENST00000368439 RNF34Q969K3 372 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 IGSF8Q969P0 613 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 TBCBQ99426 244 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 SMOC1Q9H4F8 434 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 ARHGEF38Q9NXL2 777 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 HS3ST4Q9Y661 456 aa19.59■□□□□ 0.73
CKS1B-203ENST00000368439 DOCK4Q8N1I0 1966 aa19.58■□□□□ 0.73
CKS1B-203ENST00000368439 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 A0A1B0GTH6 734 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 GOLGA8SH3BPF8 625 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 GDF9O60383 454 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 ZNF217O75362 1048 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 PAGE1O75459 146 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 ADCY5O95622 1261 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 EPHX1P07099 455 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 POLR2EP19388 210 aaKnown RBP19.58■□□□□ 0.72
CKS1B-203ENST00000368439 SULT1E1P49888 294 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 IRAK1P51617 712 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 CREB5Q02930 508 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 CENPCQ03188 943 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 CAMK2GQ13555 558 aaPredicted RBP19.58■□□□□ 0.72
CKS1B-203ENST00000368439 AUHQ13825 339 aaKnown RBP19.58■□□□□ 0.72
CKS1B-203ENST00000368439 C5orf22Q49AR2 442 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 ARTNQ5T4W7 220 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 TRIM72Q6ZMU5 477 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 TMEFF1Q8IYR6 380 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 MSANTD4Q8NCY6 345 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 SLC30A5Q8TAD4 765 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 BAP1Q92560 729 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 MRGPRX3Q96LB0 322 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 NAP1L5Q96NT1 182 aaPredicted RBP19.58■□□□□ 0.72
CKS1B-203ENST00000368439 PRDM16Q9HAZ2 1276 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 VPS45Q9NRW7 570 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 RXFP3Q9NSD7 469 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 STAP1Q9ULZ2 295 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 PLA2G4CQ9UP65 541 aa19.58■□□□□ 0.72
CKS1B-203ENST00000368439 NYNRINQ9P2P1 1898 aaKnown RBP19.58■□□□□ 0.72
CKS1B-203ENST00000368439 PI4KAP42356 2102 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CACNA1AO00555 2505 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 FOXD2O60548 495 aaPredicted RBP19.57■□□□□ 0.72
CKS1B-203ENST00000368439 ATP5BP06576 529 aaKnown RBP19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CSKP41240 450 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 PTGER3P43115 390 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 ATXN1P54253 815 aaKnown RBP19.57■□□□□ 0.72
CKS1B-203ENST00000368439 ARID5AQ03989 594 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 MTA1Q13330 715 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CDH18Q13634 790 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CLEC16AQ2KHT3 1053 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 FNDC3BQ53EP0 1204 aaKnown RBP19.57■□□□□ 0.72
CKS1B-203ENST00000368439 PITRM1Q5JRX3 1037 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 SPDYCQ5MJ68 293 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 BRMS1LQ5PSV4 323 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 LPCAT2Q7L5N7 544 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 C14orf80Q86SX3 495 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CIR1Q86X95 450 aaPredicted RBP19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CCAR2Q8N163 923 aaKnown RBP19.57■□□□□ 0.72
CKS1B-203ENST00000368439 ZNF366Q8N895 744 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CFAP57Q96MR6 1250 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 TKTL2Q9H0I9 626 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CBX8Q9HC52 389 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 ITM2CQ9NQX7 267 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 USP36Q9P275 1121 aaKnown RBP19.57■□□□□ 0.72
CKS1B-203ENST00000368439 CYP8B1Q9UNU6 501 aa19.57■□□□□ 0.72
CKS1B-203ENST00000368439 H0Y626 953 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 ZBTB24O43167 697 aaPredicted RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 MAP3K13O43283 966 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 SYNCRIPO60506 623 aaKnown RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 ENDOD1O94919 500 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 CAVIN2O95810 425 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 F9P00740 461 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 GGCXP38435 758 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 DHPSP49366 369 aaPredicted RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 GSCP56915 257 aaPredicted RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 DEUP1Q05D60 604 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 PLEKHG6Q3KR16 790 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 TTC39BQ5VTQ0 682 aaPredicted RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 TCEAL6Q6IPX3 200 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 CXorf57Q6NSI4 855 aaKnown RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 KIAA1324Q6UXG2 1013 aaKnown RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 SLC36A4Q6YBV0 504 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 IRF2BP2Q7Z5L9 587 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 PHF13Q86YI8 300 aaPredicted RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 TMPRSS6Q8IU80 811 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 ZNF683Q8IZ20 524 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 APCDD1Q8J025 514 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 TCEAL3Q969E4 200 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 AGPAT1Q99943 283 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 C11orf70Q9BRQ4 267 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 SYT11Q9BT88 431 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 WDCPQ9H6R7 721 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 PRSS16Q9NQE7 514 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 METTL5Q9NRN9 209 aaKnown RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 TMPRSS4Q9NRS4 437 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 KIAA1522Q9P206 1035 aaPredicted RBP19.56■□□□□ 0.72
CKS1B-203ENST00000368439 VANGL2Q9ULK5 521 aa19.56■□□□□ 0.72
CKS1B-203ENST00000368439 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms