RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 QSER1Q2KHR3 1735 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 GSTM1P09488 218 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 ZNF131P52739 623 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 MRPS21P82921 87 aaKnown RBP8.5□□□□□ -1.05
SSR2-202ENST00000368311 GSTM4Q03013 218 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 DPCR1Q3MIW9 517 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 TPGS1Q6ZTW0 290 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 DNAJB7Q7Z6W7 309 aaPredicted RBP8.5□□□□□ -1.05
SSR2-202ENST00000368311 SIPA1Q96FS4 1042 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 PTPN18Q99952 460 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 TRIM15Q9C019 465 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 PRDM12Q9H4Q4 367 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 AMACRQ9UHK6 382 aa8.5□□□□□ -1.05
SSR2-202ENST00000368311 MBLAC1A4D2B0 266 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 TXNDC9O14530 226 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 PMM2O15305 246 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 RGS16O15492 202 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 KCNJ13O60928 360 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 WEE1P30291 646 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 CDR2LQ86X02 465 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 MTBPQ96DY7 904 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 C16orf70Q9BSU1 422 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 VCXQ9H320 206 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 ADAMTS10Q9H324 1103 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 ADAMTS1Q9UHI8 967 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 ITM2BQ9Y287 266 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 MRPS33Q9Y291 106 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 UBR3Q6ZT12 1888 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 PRR23AA6NEV1 266 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 IDSP22304 550 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 VARSP26640 1264 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 KDSRQ06136 332 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 TAF10Q12962 218 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 MPP3Q13368 585 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 ELOAQ14241 798 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 ICE2Q659A1 982 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 NT5DC3Q86UY8 548 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 TRAIPQ9BWF2 469 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 FAM153AQ9UHL3 310 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 TNS1Q9HBL0 1735 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 KCNN4O15554 427 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 AGXTP21549 392 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 CORO1AP31146 461 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 GPD2P43304 727 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 RANBP1P43487 201 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 CXCL12P48061 93 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 NDST2P52849 883 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 NAA30Q147X3 362 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 NT5DC1Q5TFE4 455 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 LRRC38Q5VT99 294 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 IZUMO3Q5VZ72 239 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 FAM109BQ6ICB4 259 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 SETD3Q86TU7 594 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 DNAAF5Q86Y56 855 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 SLC39A11Q8N1S5 342 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 FAM3CQ92520 227 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 HAS1Q92839 578 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 PTPRN2Q92932 1015 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 SH2D3AQ9BRG2 576 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 ABHD10Q9NUJ1 306 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 TARSL2A2RTX5 802 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 F8VP50 259 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 GADD45BO75293 160 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 CTDNEP1O95476 244 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 TKTP29401 623 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 HOXC13P31276 330 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 SPRP35270 261 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 CASRP41180 1078 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 BRCC3P46736 316 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 STK4Q13043 487 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 VPS37AQ8NEZ2 397 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 GRIN3AQ8TCU5 1115 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 SH3RF2Q8TEC5 729 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 CSPG4P5Q96PW8 444 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 KRCC1Q9NPI7 259 aaPredicted RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 LATS2Q9NRM7 1088 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 MRTO4Q9UKD2 239 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 CDV3Q9UKY7 258 aaKnown RBP8.49□□□□□ -1.05
SSR2-202ENST00000368311 CDC14AQ9UNH5 594 aa8.49□□□□□ -1.05
SSR2-202ENST00000368311 OR5K4A6NMS3 321 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 C9J4A7 227 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 TSPAN3O60637 253 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 RNF40O75150 1001 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 ACAT1P24752 427 aaKnown RBP8.48□□□□□ -1.05
SSR2-202ENST00000368311 CNTFP26441 200 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 RASSF2P50749 326 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 MC1RQ01726 317 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 NSUN2Q08J23 767 aaKnown RBP eCLIP8.48□□□□□ -1.05
SSR2-202ENST00000368311 LCLAT1Q6UWP7 414 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 TCEAL8Q8IYN2 117 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 PCDH20Q8N6Y1 951 aaKnown RBP8.48□□□□□ -1.05
SSR2-202ENST00000368311 CYP2W1Q8TAV3 490 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 UHRF1Q96T88 793 aaPredicted RBP8.48□□□□□ -1.05
SSR2-202ENST00000368311 ZCWPW1Q9H0M4 648 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 SAMSN1Q9NSI8 373 aaKnown RBP8.48□□□□□ -1.05
SSR2-202ENST00000368311 HCN3Q9P1Z3 774 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 GNPTGQ9UJJ9 305 aa8.48□□□□□ -1.05
SSR2-202ENST00000368311 COL5A3P25940 1745 aaPredicted RBP8.48□□□□□ -1.05
SSR2-202ENST00000368311 KHNYNO15037 678 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms