RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 GUCY2DQ02846 1103 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 TEAD2Q15562 447 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 LRIT3Q3SXY7 679 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 BRMS1LQ5PSV4 323 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 NADSYN1Q6IA69 706 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 LRIG3Q6UXM1 1119 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 ING5Q8WYH8 240 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 FAF2Q96CS3 445 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 KLF16Q9BXK1 252 aaPredicted RBP12.62□□□□□ -0.39
CAPN9-203ENST00000366666 ARHGEF4Q9NR80 690 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN9-203ENST00000366666 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
CAPN9-203ENST00000366666 MYOFQ9NZM1 2061 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 SHROOM3Q8TF72 1996 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 OLFM2O95897 454 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 MBL2P11226 248 aaPredicted RBP12.61□□□□□ -0.39
CAPN9-203ENST00000366666 HSPA9P38646 679 aaKnown RBP12.61□□□□□ -0.39
CAPN9-203ENST00000366666 TUBP50607 506 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 SLC10A2Q12908 348 aaPredicted RBP12.61□□□□□ -0.39
CAPN9-203ENST00000366666 ADGRE1Q14246 886 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 CBX2Q14781 532 aaPredicted RBP12.61□□□□□ -0.39
CAPN9-203ENST00000366666 ARL13BQ3SXY8 428 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 PABPC1LQ4VXU2 614 aaKnown RBP12.61□□□□□ -0.39
CAPN9-203ENST00000366666 MS4A13Q5J8X5 152 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 PRSS36Q5K4E3 855 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 KLHDC10Q6PID8 442 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 C1orf228Q6PIY5 440 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 EP400NLQ6ZTU2 488 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 BBS12Q6ZW61 710 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 MAP7D3Q8IWC1 876 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 RIN3Q8TB24 985 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 ITFG1Q8TB96 612 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 LRCH3Q96II8 777 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 ZSWIM3Q96MP5 696 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 ZNF670Q9BS34 389 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 AMACRQ9UHK6 382 aa12.61□□□□□ -0.39
CAPN9-203ENST00000366666 ZSCAN5CA6NGD5 496 aaPredicted RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 EEF2KO00418 725 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 TJP3O95049 919 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 HNRNPA1P09651 372 aaKnown RBP eCLIP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 LSP1P33241 339 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 PPP3CCP48454 512 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 OTUD4Q01804 1114 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 GBE1Q04446 702 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 DLX2Q07687 328 aaPredicted RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 DPYSQ14117 519 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 NCBP2-AS2Q69YL0 99 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 RFX8Q6ZV50 586 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 PDZD4Q76G19 769 aaPredicted RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 PRUNE1Q86TP1 453 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 PSTKQ8IV42 348 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 DENND1CQ8IV53 801 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 ARFGAP2Q8N6H7 521 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 OTUD6BQ8N6M0 293 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 ST13P5Q8NFI4 369 aaPredicted RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 ACTL9Q8TC94 416 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 IFT81Q8WYA0 676 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 MRPS31Q92665 395 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 ATP6V1G3Q96LB4 118 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 DCLK3Q9C098 648 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 MPP6Q9NZW5 540 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 DNPEPQ9ULA0 475 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 VANGL2Q9ULK5 521 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 CCL26Q9Y258 94 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 CPQQ9Y646 472 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 RAD51CO43502 376 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 FSBPO95073 299 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 C1RP00736 705 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 KRT14P02533 472 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 FAM153BP0C7A2 387 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 CEBPBP17676 345 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 NR1D1P20393 614 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 SLC6A4P31645 630 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 HNRNPH1P31943 449 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 NRLP54845 237 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 AIF1P55008 147 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 MLLT6P55198 1093 aaPredicted RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 RING1Q06587 406 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 CYP1B1Q16678 543 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 FAM153CQ494X1 144 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 RARS2Q5T160 578 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 MANEALQ5VSG8 457 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 RAP1GAP2Q684P5 730 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 SLC9A4Q6AI14 798 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 RFWD3Q6PCD5 774 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 ZNF683Q8IZ20 524 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 NPWQ8N729 165 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 CASKIN2Q8WXE0 1202 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 SMG7Q92540 1137 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 MAGOHBQ96A72 148 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 HAPLN3Q96S86 360 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 NAP1L3Q99457 506 aaPredicted RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 MAK16Q9BXY0 300 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 OSBPL2Q9H1P3 480 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 NSUN3Q9H649 340 aaKnown RBP12.6□□□□□ -0.39
CAPN9-203ENST00000366666 NDFIP2Q9NV92 336 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 FAM153AQ9UHL3 310 aa12.6□□□□□ -0.39
CAPN9-203ENST00000366666 HBS1LQ9Y450 684 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms