RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 BHLHE22Q8NFJ8 381 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 PURBQ96QR8 312 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 CDRT15Q96T59 188 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 SERHL2Q9H4I8 314 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 STN1Q9H668 368 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ATP13A1Q9HD20 1204 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 BPIFA1Q9NP55 256 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 SERHLQ9NQF3 203 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 MCM8Q9UJA3 840 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 PPIEQ9UNP9 301 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 A0A1B0GW55 424 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DUX4L2P0CJ85 424 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DUX4L3P0CJ86 424 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DUX4L4P0CJ87 422 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DUX4L5P0CJ88 424 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DUX4L6P0CJ89 424 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DUX4L7P0CJ90 424 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 BDNFP23560 247 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 RALGDSQ12967 914 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DEFB106AQ8N104 65 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 SPATA20Q8TB22 786 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ZNF606Q8WXB4 792 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 APOPT1Q96IL0 206 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 A1CFQ9NQ94 594 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 VPS45Q9NRW7 570 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DUX4Q9UBX2 424 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 NDUFAF1Q9Y375 327 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 USP31Q70CQ4 1352 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 E9PCH4 1651 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ZNF839A8K0R7 811 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DNALI1O14645 258 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 RNASEH1O60930 286 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ATP6V1C1P21283 382 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 FASP25445 335 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 RBL1P28749 1068 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 NUP107P57740 925 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 SEC23AQ15436 765 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 FAM98BQ52LJ0 330 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 OVOS1Q6IE37 1185 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 KRT77Q7Z794 578 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ELOA2Q8IYF1 753 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 CAVIN3Q969G5 261 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 RNFT2Q96EX2 444 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 SPACA7Q96KW9 195 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 EMILIN2Q9BXX0 1053 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 PCDH9Q9HC56 1237 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 AAASQ9NRG9 546 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 CROTQ9UKG9 612 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 BARX2Q9UMQ3 279 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 E5RJQ4 531 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 F8VP50 259 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 TP73O15350 636 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 GAS2O43903 313 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 RAMP2O60895 175 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 SLITRK3O94933 977 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 MRPS22P82650 360 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ACAP1Q15027 740 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 TAF2Q6P1X5 1199 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 IL27RAQ6UWB1 636 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 TMC5Q6UXY8 1006 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 STK32CQ86UX6 486 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 SLC22A9Q8IVM8 553 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 FBXO30Q8TB52 745 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ZNF75CPQ92670 426 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 PWWP2AQ96N64 755 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 PAIP1Q9H074 479 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 TKTL2Q9H0I9 626 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 MROH8Q9H579 483 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ZDHHC6Q9H6R6 413 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 AVENQ9NQS1 362 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 STARD7Q9NQZ5 370 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 IL1RAPL1Q9NZN1 696 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ITGA11Q9UKX5 1188 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 CEP170BQ9Y4F5 1589 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 IFRD1O00458 451 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 MRASO14807 208 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 F9P00740 461 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 YBX3P16989 372 aaKnown RBP eCLIP8.22□□□□□ -1.099e-12■□□□□ 9.1
CTNND1-204ENST00000361796 PAX7P23759 505 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ADRA1DP25100 572 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 GRK4P32298 578 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 EIF2B2P49770 351 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 DGCR6Q14129 220 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 NOL9Q5SY16 702 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 KLHL17Q6TDP4 642 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 MACC1Q6ZN28 852 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ZNF621Q6ZSS3 439 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 MARK2Q7KZI7 788 aaKnown RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 ZNF438Q7Z4V0 828 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 POLNQ7Z5Q5 900 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 EID3Q8N140 333 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 GMCL1P1Q8NEA9 526 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 EMID1Q96A84 441 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-204ENST00000361796 KAZALD1Q96I82 304 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 OLFM1Q99784 485 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 XPNPEP3Q9NQH7 507 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 PRKAG3Q9UGI9 489 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 SLC24A2Q9UI40 661 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 PLA2G4CQ9UP65 541 aa8.22□□□□□ -1.09
CTNND1-204ENST00000361796 FAM220BPB1ANY3 271 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms