RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 ABCE1P61221 599 aaKnown RBP15.29■□□□□ 0.04
UBAP1-202ENST00000359544 ZNF423Q2M1K9 1284 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 LMBRD2Q68DH5 695 aaPredicted RBP15.29■□□□□ 0.04
UBAP1-202ENST00000359544 ELMSAN1Q6PJG2 1045 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 C4orf19Q8IY42 314 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 KYQ8NBH2 561 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 DEPDC1BQ8WUY9 529 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 TMIGD2Q96BF3 282 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 APOBEC3GQ9HC16 384 aaKnown RBP15.29■□□□□ 0.04
UBAP1-202ENST00000359544 PKD2L1Q9P0L9 805 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 EPS15L1Q9UBC2 864 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 CDY2AQ9Y6F7 541 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 CDY1Q9Y6F8 540 aa15.29■□□□□ 0.04
UBAP1-202ENST00000359544 HMX2A2RU54 273 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 C19orf81C9J6K1 198 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 XPO1O14980 1071 aaKnown RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 PLIN3O60664 434 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 LRCH4O75427 683 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 HARS2P49590 506 aaKnown RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 CCR3P51677 355 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 CNTN2Q02246 1040 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 SP3Q02447 781 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 XKR9Q5GH70 373 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 KCNT1Q5JUK3 1230 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 KRT80Q6KB66 452 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 GPR141Q7Z602 305 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 BHLHE22Q8NFJ8 381 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 SGF29Q96ES7 293 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 RMND5BQ96G75 393 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 FAM84AQ96KN4 292 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 TXNRD2Q9NNW7 524 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 FBXO28Q9NVF7 368 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 DCDC2Q9UHG0 476 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 HEMK1Q9Y5R4 338 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 FUOMA2VDF0 154 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 CLASP2O75122 1294 aaKnown RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 VNN1O95497 513 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 OCM2P0CE71 109 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 OCMP0CE72 109 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 KCNA4P22459 653 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 THOP1P52888 689 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 PCLAFQ15004 111 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 NOMO1Q15155 1222 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 PIGGQ5H8A4 983 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 TMEM53Q6P2H8 277 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 C17orf99Q6UX52 265 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 UNC5AQ6ZN44 842 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 SETD3Q86TU7 594 aaPredicted RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 SAMD3Q8N6K7 520 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 DDHD1Q8NEL9 900 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 PDCD6IPQ8WUM4 868 aaKnown RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 EME1Q96AY2 570 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 ZNF597Q96LX8 424 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 PARK7Q99497 189 aaKnown RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 SH2D3AQ9BRG2 576 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 NTPCRQ9BSD7 190 aaKnown RBP15.28■□□□□ 0.04
UBAP1-202ENST00000359544 MAF1Q9H063 256 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 RSAD1Q9HA92 442 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 XPNPEP1Q9NQW7 623 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 ANKEF1Q9NU02 776 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 SELENONQ9NZV5 590 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 EMCNQ9ULC0 261 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 TMX2Q9Y320 296 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 RNF11Q9Y3C5 154 aa15.28■□□□□ 0.04
UBAP1-202ENST00000359544 AIM2O14862 343 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 ZBTB14O43829 449 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 XRCC1P18887 633 aaPredicted RBP15.27■□□□□ 0.04
UBAP1-202ENST00000359544 IL1R2P27930 398 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 ZNF132P52740 706 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 TGFBIQ15582 683 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 ZNF829Q3KNS6 432 aaPredicted RBP15.27■□□□□ 0.04
UBAP1-202ENST00000359544 FAXCQ5TGI0 409 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 VWA5B1Q5TIE3 1220 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 NIPA1Q7RTP0 329 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 CARM1Q86X55 608 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 DSELQ8IZU8 1212 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 TMEM102Q8N9M5 508 aaPredicted RBP15.27■□□□□ 0.04
UBAP1-202ENST00000359544 FNIP1Q8TF40 1166 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 CDRT15Q96T59 188 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 CAAP1Q9H8G2 361 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 TBC1D22BQ9NU19 505 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 TUBA8Q9NY65 449 aaPredicted RBP15.27■□□□□ 0.04
UBAP1-202ENST00000359544 CDH7Q9ULB5 785 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 SLC8A2Q9UPR5 921 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 ADGRA2Q96PE1 1338 aa15.27■□□□□ 0.04
UBAP1-202ENST00000359544 MKI67P46013 3256 aaKnown RBP15.27■□□□□ 0.04
UBAP1-202ENST00000359544 RGSL1A5PLK6 1076 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 SLC15A5A6NIM6 579 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 BCAS2O75934 225 aaPredicted RBP15.27■□□□□ 0.03
UBAP1-202ENST00000359544 ME2P23368 584 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 NRLP54845 237 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 PPP2R5DQ14738 602 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 EPGNQ6UW88 154 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 GPR180Q86V85 440 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 CAND1Q86VP6 1230 aaKnown RBP15.27■□□□□ 0.03
UBAP1-202ENST00000359544 SLC15A3Q8IY34 581 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 C17orf50Q8WW18 174 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 ISOC1Q96CN7 298 aa15.27■□□□□ 0.03
UBAP1-202ENST00000359544 LENG8Q96PV6 779 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms