RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 WDR59Q6PJI9 974 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 USP45Q70EL2 814 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 ZNF276Q8N554 614 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 SHKBP1Q8TBC3 707 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 PRCCQ92733 491 aaPredicted RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 ISCUQ9H1K1 167 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 OSBPL2Q9H1P3 480 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 PPANQ9NQ55 473 aaKnown RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 PKD2L2Q9NZM6 624 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 NUDT5Q9UKK9 219 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 PCDH8O95206 1070 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 CPP00450 1065 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 HNRNPH3P31942 346 aaKnown RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 MARC1Q5VT66 337 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 ZDHHC20Q5W0Z9 365 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 SYT10Q6XYQ8 523 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 RFX8Q6ZV50 586 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 CROCCP2Q86T23 111 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 PRPF39Q86UA1 669 aaKnown RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 NAT16Q8N8M0 369 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 TPCN2Q8NHX9 752 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 BCL7CQ8WUZ0 217 aaPredicted RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 FCRL2Q96LA5 508 aaPredicted RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 CPXM1Q96SM3 734 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 VPS37BQ9H9H4 285 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 CSNK1G1Q9HCP0 422 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 IVLP07476 585 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 SRFP11831 508 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 SLC44A4Q53GD3 710 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 PLEKHA7Q6IQ23 1121 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 SDCCAG8Q86SQ7 713 aaPredicted RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 IRF2BP1Q8IU81 584 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 CPXM2Q8N436 756 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 BAP1Q92560 729 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 GLMNQ92990 594 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 MAGOHBQ96A72 148 aaKnown RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 C1orf74Q96LT6 269 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 ZSWIM1Q9BR11 485 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 ARHGEF3Q9NR81 526 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 NUMBLQ9Y6R0 609 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 DDX3XO00571 662 aaKnown RBP eCLIP9.44□□□□□ -0.9
UPF2-202ENST00000357604 ZNF217O75362 1048 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 S100BP04271 92 aaPredicted RBP9.44□□□□□ -0.9
UPF2-202ENST00000357604 ANKRD20A8PQ5CZ79 823 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 NAPEPLDQ6IQ20 393 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 SLC36A4Q6YBV0 504 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 SPOCD1Q6ZMY3 1216 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 PID1Q7Z2X4 250 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 ZDHHC6Q9H6R6 413 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 EPS15L1Q9UBC2 864 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 PKP3Q9Y446 797 aa9.44□□□□□ -0.9
UPF2-202ENST00000357604 MSI1O43347 362 aaKnown RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 L1CAMP32004 1257 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 CHRNA3P32297 505 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 ZNF284Q2VY69 593 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 RGL4Q8IZJ4 473 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 SLC2A13Q96QE2 648 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 ECT2Q9H8V3 914 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 PAK5Q9P286 719 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 NOCTQ9UK39 431 aaKnown RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 SCML1Q9UN30 329 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 CFAP99D6REC4 459 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 LINC01565O15544 149 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 DCXO43602 365 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 MIPP30301 263 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 HSP90B2PQ58FF3 399 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 RALGPS1Q5JS13 557 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 ZNF776Q68DI1 518 aaPredicted RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 SIX5Q8N196 739 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 FAM114A2Q9NRY5 505 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 MTMR10Q9NXD2 777 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 WNT6Q9Y6F9 365 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 EPHX1P07099 455 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 MMP13P45452 471 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 GSCP56915 257 aaPredicted RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 FAM78AQ5JUQ0 283 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 HTR3DQ70Z44 454 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 ADAMTS19Q8TE59 1207 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 WHAMMQ8TF30 809 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 KRT12Q99456 494 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 OSBPL1AQ9BXW6 950 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 POLR1EQ9GZS1 481 aaKnown RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 FZD10Q9ULW2 581 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 C2orf81A6NN90 581 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 PDE2AO00408 941 aaPredicted RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 MDM4O15151 490 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 KCNN4O15554 427 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 PAPSS1O43252 624 aaPredicted RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 TYRP14679 529 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 GJA1P17302 382 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 POU3F3P20264 500 aaPredicted RBP9.43□□□□□ -0.9
UPF2-202ENST00000357604 HCAR3P49019 387 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 TMED2Q15363 201 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 DHCR24Q15392 516 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 MS4A13Q5J8X5 152 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 TFAP2DQ7Z6R9 452 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 KLHL7Q8IXQ5 586 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 KATNAL2Q8IYT4 538 aa9.43□□□□□ -0.9
UPF2-202ENST00000357604 GSTCDQ8NEC7 633 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms