RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SIGLEC16A6NMB1 481 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SCAMP3O14828 347 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 GRAP2O75791 330 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 F9P00740 461 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 KLKB1P03952 638 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 APODP05090 189 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SKILP12757 684 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 GPD1P21695 349 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SDC4P31431 198 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 CCR1P32246 355 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 RDXP35241 583 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FLT3P36888 993 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 PITX1P78337 314 aaPredicted RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SRSF11Q05519 484 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 DEUP1Q05D60 604 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 GRSF1Q12849 480 aaKnown RBP eCLIP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 PON2Q15165 354 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TAF5Q15542 800 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SLC25A52Q3SY17 297 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 HSF5Q4G112 596 aaPredicted RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FBXO43Q4G163 708 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 MPPE1Q53F39 396 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TTC39BQ5VTQ0 682 aaPredicted RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SYPL2Q5VXT5 272 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 PLEKHA7Q6IQ23 1121 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FSTL4Q6MZW2 842 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TRNP1Q6NT89 227 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 RHBDF2Q6PJF5 856 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TXNDC11Q6PKC3 985 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 STRADAQ7RTN6 431 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 CHSY1Q86X52 802 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 DENND1CQ8IV53 801 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TMEM105Q8N8V8 129 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TTC8Q8TAM2 541 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 WFIKKN2Q8TEU8 576 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 BTN2A3PQ96KV6 586 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TBCBQ99426 244 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ISCUQ9H1K1 167 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 LINC00597Q9H2U6 94 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ARHGEF38Q9NXL2 777 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TAS2R14Q9NYV8 317 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 DLGAP2Q9P1A6 1054 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ARHGAP20Q9P2F6 1191 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SLC12A6Q9UHW9 1150 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 NDRG2Q9UN36 371 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 OTOL1A6NHN0 477 aaPredicted RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FAM170BA6NMN3 283 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 KCNU1A8MYU2 1149 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 GOLGA6L6A8MZA4 724 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 NEDD8-MDP1E9PL57 170 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 M0QYT0 321 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ENDOD1O94919 500 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 CHRNB1P11230 501 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 KRT3P12035 628 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TYRP14679 529 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ABCB4P21439 1286 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TACR2P21452 398 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 AVPR2P30518 371 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 EIF4A3P38919 411 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 CXCR3P49682 368 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 VCPP55072 806 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 KDSRQ06136 332 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 CCINQ13939 588 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 E2F5Q15329 346 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ANO4Q32M45 955 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FAM133BQ5BKY9 247 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ZC3H12AQ5D1E8 599 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 MPP7Q5T2T1 576 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ADGRF1Q5T601 910 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FYB2Q5VWT5 728 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 NADSYN1Q6IA69 706 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FOXR1Q6PIV2 292 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 WDR59Q6PJI9 974 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 C12orf40Q86WS4 652 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ADGRG2Q8IZP9 1017 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 TERB1Q8NA31 727 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 DTWD2Q8NBA8 298 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 JOSD2Q8TAC2 188 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FNIP1Q8TF40 1166 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 RXFP2Q8WXD0 754 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 ACDQ96AP0 544 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 PRICKLE1Q96MT3 831 aaPredicted RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 MCEEQ96PE7 176 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 PNKPQ96T60 521 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 BBS2Q9BXC9 721 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SLC2A11Q9BYW1 496 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 DEF6Q9H4E7 631 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 PRMT8Q9NR22 394 aaPredicted RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 PARVAQ9NVD7 372 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 DNAJC17Q9NVM6 304 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 IMPACTQ9P2X3 320 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 CNOT8Q9UFF9 292 aaKnown RBP4.11□□□□□ -1.75
CNOT4-202ENST00000356162 LCMT1Q9UIC8 334 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 FBXO10Q9UK96 956 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SIT1Q9Y3P8 196 aa4.11□□□□□ -1.75
CNOT4-202ENST00000356162 SYNJ2BP-COX16A0A087WUM0 186 aa4.1□□□□□ -1.75
CNOT4-202ENST00000356162 TMCO5BA8MYB1 307 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms