RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 CLIC5Q9NZA1 410 aa26.41■■□□□ 1.82
CLK2-201ENST00000355560 SHROOM3Q8TF72 1996 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 ABHD14A-ACY1A0A1B0GW23 586 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 C2CD2LO14523 706 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 ITGB8P26012 769 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 PSMB4P28070 264 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 GEMIN4P57678 1058 aaKnown RBP26.4■■□□□ 1.82
CLK2-201ENST00000355560 RPL10AP62906 217 aaKnown RBP26.4■■□□□ 1.82
CLK2-201ENST00000355560 EFEMP1Q12805 493 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 ZSCAN26Q16670 478 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 KIAA1841Q6NSI8 718 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 ARMC5Q96C12 935 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 TBC1D31Q96DN5 1066 aa26.4■■□□□ 1.82
CLK2-201ENST00000355560 PRDM5Q9NQX1 630 aaPredicted RBP26.4■■□□□ 1.82
CLK2-201ENST00000355560 KLHL8Q9P2G9 620 aaPredicted RBP26.4■■□□□ 1.82
CLK2-201ENST00000355560 KIAA0100Q14667 2235 aaKnown RBP26.4■■□□□ 1.82
CLK2-201ENST00000355560 CREB1P16220 341 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 ATF6P18850 670 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 PTPN3P26045 913 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 HOXC13P31276 330 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 HTR7P34969 479 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 OR1D2P34982 312 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 MAGEA3P43357 314 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 PSEN1P49768 467 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 KLHL38Q2WGJ6 581 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 TADA2BQ86TJ2 420 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 BCAS4Q8TDM0 211 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 GIPC2Q8TF65 315 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 SLC39A13Q96H72 371 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.39■■□□□ 1.823e-7■□□□□ 8.5
CLK2-201ENST00000355560 SLC24A2Q9UI40 661 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 HS3ST4Q9Y661 456 aa26.39■■□□□ 1.82
CLK2-201ENST00000355560 CSF2RAP15509 400 aa26.39■■□□□ 1.81
CLK2-201ENST00000355560 GRIA1P42261 906 aa26.39■■□□□ 1.81
CLK2-201ENST00000355560 TBX4P57082 545 aa26.39■■□□□ 1.81
CLK2-201ENST00000355560 DEFB103AP81534 67 aa26.39■■□□□ 1.81
CLK2-201ENST00000355560 PID1Q7Z2X4 250 aa26.39■■□□□ 1.81
CLK2-201ENST00000355560 SRRM1Q8IYB3 904 aaKnown RBP26.39■■□□□ 1.81
CLK2-201ENST00000355560 PDCD7Q8N8D1 485 aaKnown RBP26.39■■□□□ 1.81
CLK2-201ENST00000355560 MAML1Q92585 1016 aa26.39■■□□□ 1.81
CLK2-201ENST00000355560 XPO6Q96QU8 1125 aaKnown RBP26.39■■□□□ 1.81
CLK2-201ENST00000355560 CATSPERBQ9H7T0 1116 aa26.39■■□□□ 1.81
CLK2-201ENST00000355560 XAB2Q9HCS7 855 aaKnown RBP26.39■■□□□ 1.81
CLK2-201ENST00000355560 PPANQ9NQ55 473 aaKnown RBP26.39■■□□□ 1.81
CLK2-201ENST00000355560 BACE2Q9Y5Z0 518 aa26.39■■□□□ 1.81
CLK2-201ENST00000355560 FGF10O15520 208 aaPredicted RBP26.38■■□□□ 1.81
CLK2-201ENST00000355560 PIAS1O75925 651 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 TBX18O95935 607 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 SLC2A3P11169 496 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 PARP6Q2NL67 630 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 RASIP1Q5U651 963 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 CFAP36Q96G28 342 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 EPN3Q9H201 632 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 TMEM51Q9NW97 253 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 PSMC3IPQ9P2W1 217 aaPredicted RBP26.38■■□□□ 1.81
CLK2-201ENST00000355560 FETUBQ9UGM5 382 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 TCRBV9S1A1TA0A576 114 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 RASA4BC9J798 803 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 RASA4O43374 803 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 SPAG6O75602 509 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 SARNPP82979 210 aaKnown RBP26.38■■□□□ 1.81
CLK2-201ENST00000355560 CDK16Q00536 496 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 ZNF689Q96CS4 500 aaPredicted RBP26.38■■□□□ 1.81
CLK2-201ENST00000355560 LRRC39Q96DD0 335 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 EIF2B3Q9NR50 452 aaKnown RBP26.38■■□□□ 1.81
CLK2-201ENST00000355560 OLA1Q9NTK5 396 aaKnown RBP26.38■■□□□ 1.81
CLK2-201ENST00000355560 PCDH10Q9P2E7 1040 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 IGSF9Q9P2J2 1179 aa26.38■■□□□ 1.81
CLK2-201ENST00000355560 ZC3H7BQ9UGR2 993 aaKnown RBP26.38■■□□□ 1.81
CLK2-201ENST00000355560 MAGED2Q9UNF1 606 aaPredicted RBP26.38■■□□□ 1.81
CLK2-201ENST00000355560 E9PAM4 449 aa26.37■■□□□ 1.81
CLK2-201ENST00000355560 MTSS1O43312 755 aa26.37■■□□□ 1.81
CLK2-201ENST00000355560 C10orf120Q5SQS8 335 aa26.37■■□□□ 1.81
CLK2-201ENST00000355560 PIK3R6Q5UE93 754 aa26.37■■□□□ 1.81
CLK2-201ENST00000355560 MIB1Q86YT6 1006 aa26.37■■□□□ 1.81
CLK2-201ENST00000355560 PAFAH2Q99487 392 aa26.37■■□□□ 1.81
CLK2-201ENST00000355560 COMMD8Q9NX08 183 aa26.37■■□□□ 1.81
CLK2-201ENST00000355560 TMEM120BA0PK00 339 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 TRIM43BA6NCK2 446 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 SLC38A8A6NNN8 435 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 CPP00450 1065 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 TIMP1P01033 207 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 APOEP02649 317 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 TUBP50607 506 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 SEC24CP53992 1094 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 RASA2Q15283 850 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 ARTNQ5T4W7 220 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 TRIM43Q96BQ3 446 aaPredicted RBP26.36■■□□□ 1.81
CLK2-201ENST00000355560 ZNF558Q96NG5 402 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 INTS9Q9NV88 658 aaKnown RBP26.36■■□□□ 1.81
CLK2-201ENST00000355560 MARCH2Q9P0N8 246 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 SOD2P04179 222 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 BRAFP15056 766 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 ZBTB17Q13105 803 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 NR1H3Q13133 447 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 TMEM169Q96HH4 297 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 CYTH2Q99418 400 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 RC3H2Q9HBD1 1191 aaKnown RBP26.36■■□□□ 1.81
CLK2-201ENST00000355560 ACTL7BQ9Y614 415 aa26.36■■□□□ 1.81
CLK2-201ENST00000355560 MRPL42Q9Y6G3 142 aaKnown RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms