RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TMEM132CQ8N3T6 1108 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 FICDQ9BVA6 458 aa12.98□□□□□ -0.33
SYNCRIP-201ENST00000355238 LOC100506127A0A0U1RQW1 187 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 TRMUO75648 421 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ASMTLO95671 621 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 PSME3P61289 254 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 BNIP1Q12981 228 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 SLC15A2Q16348 729 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 LRRC49Q8IUZ0 686 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 PCDH20Q8N6Y1 951 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 PROX1Q92786 737 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 MID1IP1Q9NPA3 183 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 WBP11Q9Y2W2 641 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 A0A087X1B8 175 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 CRTAMO95727 393 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 MFSD7Q6UXD7 560 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 TTC30BQ8N4P2 665 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 MYDGFQ969H8 173 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 TSEN34Q9BSV6 310 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 LRRC19Q9H756 370 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 GGA3Q9NZ52 723 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 LSM7Q9UK45 103 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 MTF2Q9Y483 593 aaPredicted RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ATP12AP54707 1039 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZNF284Q2VY69 593 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ILDR1Q86SU0 546 aaPredicted RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ATP6V0D2Q8N8Y2 350 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 PDPRQ8NCN5 879 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 POP5Q969H6 163 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ELOVL6Q9H5J4 265 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 USP31Q70CQ4 1352 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 CHADO15335 359 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 CYP2C9P11712 490 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 FEN1P39748 380 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 GCNT1Q02742 428 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 PQLC1Q8N2U9 271 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 UXS1Q8NBZ7 420 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ACMSDQ8TDX5 336 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 REEP1Q9H902 201 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ING3Q9NXR8 418 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 RAB26Q9ULW5 256 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 POLIQ9UNA4 740 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 MADDQ8WXG6 1647 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 HACD1B0YJ81 288 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 SNRPB2P08579 225 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 PABPC1P11940 636 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 DDX39BQ13838 428 aaKnown RBP12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 OR56A4Q8NGH8 313 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 CYP3A43Q9HB55 503 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 CCNB1IP1Q9NPC3 277 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 RAPGEFL1Q9UHV5 662 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZNF180Q9UJW8 692 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 NUDT5Q9UKK9 219 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 PSMD13Q9UNM6 376 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
SYNCRIP-201ENST00000355238 APOC4-APOC2K7ER74 178 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 RGS20O76081 388 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 APOC2P02655 101 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 LYNP07948 512 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 NPR3P17342 541 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 LGALS3BPQ08380 585 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 DPYSL3Q14195 570 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 ANKS6Q68DC2 871 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 HS6ST3Q8IZP7 471 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 FBXO39Q8N4B4 442 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 LRRC17Q8N6Y2 441 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 PREX2Q70Z35 1606 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 GSC2O15499 205 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 MGRN1O60291 552 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 TXNP10599 105 aaKnown RBP12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 MGAT1P26572 445 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 TAF6P49848 677 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 BST1Q10588 318 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 SHROOM1Q2M3G4 852 aaPredicted RBP12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 DENND6AQ8IWF6 608 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 SLC35C1Q96A29 364 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 MBOAT7Q96N66 472 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 POMKQ9H5K3 350 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 S100A14Q9HCY8 104 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 STON1Q9Y6Q2 735 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 NCANO14594 1321 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 C21orf2O43822 256 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 HOXB8P17481 243 aaPredicted RBP12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 NAMPTP43490 491 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 BCAT1P54687 386 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 ARPC4P59998 168 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 ZNF268Q14587 947 aaPredicted RBP12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 WDR49Q8IV35 697 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 GPRASP2Q96D09 838 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 SMAD5Q99717 465 aaKnown RBP12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 TEX13BQ9BXU2 312 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 DPP3Q9NY33 737 aa12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 CCDC59Q9P031 241 aaKnown RBP12.96□□□□□ -0.33
SYNCRIP-201ENST00000355238 CSPG5O95196 566 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 CYP1A1P04798 512 aaPredicted RBP12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 SREBF1P36956 1147 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 HTR3CQ8WXA8 447 aa12.96□□□□□ -0.34
SYNCRIP-201ENST00000355238 MTMR12Q9C0I1 747 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms