RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PITX1P78337 314 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 SLC18A2Q05940 514 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 DPYSL3Q14195 570 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 LBRQ14739 615 aaKnown RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 TAZQ16635 292 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 FAM102AQ5T9C2 384 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 C1orf53Q5VUE5 145 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 OR6B2Q6IFH4 312 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 ALYREFQ86V81 257 aaKnown RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 PIGZQ86VD9 579 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 VPS52Q8N1B4 723 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 TTC39CQ8N584 583 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 TTC13Q8NBP0 860 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 SLC44A1Q8WWI5 657 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 MCUR1Q96AQ8 359 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 OXNAD1Q96HP4 312 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 TOX2Q96NM4 488 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 PEBP4Q96S96 227 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 TUBB6Q9BUF5 446 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 FTHL17Q9BXU8 183 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 GPR62Q9BZJ7 368 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 NMUR2Q9GZQ4 415 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 ARHGEF4Q9NR80 690 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 SPATS2LQ9NUQ6 558 aaKnown RBP8.86□□□□□ -0.99
TRIM55-204ENST00000353317 PCSK1NQ9UHG2 260 aa8.86□□□□□ -0.99
TRIM55-204ENST00000353317 C2CD4BA6NLJ0 364 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 FAM155BO75949 473 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 PSMG1O95456 288 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 HSPA1AP0DMV8 641 aaKnown RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 HSPA1BP0DMV9 641 aaKnown RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 RBP3P10745 1247 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 ESRRAP11474 423 aaPredicted RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SKIP12755 728 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SP100P23497 879 aaPredicted RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 OR1G1P47890 313 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 EIF3EP60228 445 aaKnown RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 OCRLQ01968 901 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SLC34A1Q06495 639 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 KRT72Q14CN4 511 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 HSF5Q4G112 596 aaPredicted RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 DCLRE1AQ6PJP8 1040 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 LRRC74BQ6ZQY2 392 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 TAS1R1Q7RTX1 841 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 PRPF39Q86UA1 669 aaKnown RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 STKLD1Q8NE28 680 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SEPT8Q92599 483 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SUSD3Q96L08 255 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 DUSP16Q9BY84 665 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SYNCQ9H7C4 482 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 MARCH5Q9NX47 278 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 DLGAP2Q9P1A6 1054 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 STRIP2Q9ULQ0 834 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 LRCH1Q9Y2L9 728 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 TEX264Q9Y6I9 313 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 LTBP2Q14767 1821 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 HHLA1C9JL84 531 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 APOC4-APOC2K7ER74 178 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 FCHO1O14526 889 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 NRP1O14786 923 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 APOC2P02655 101 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 CYP11A1P05108 521 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 INHBAP08476 426 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 CPA2P48052 419 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SERPINB4P48594 390 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 MAP3K7CLP57077 242 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 MXRA7P84157 204 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 BST2Q10589 180 aaKnown RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 RCN2Q14257 317 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 CCDC14Q49A88 953 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 FAM171BQ6P995 826 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 RSPO2Q6UXX9 243 aaPredicted RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 RFX8Q6ZV50 586 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 HFE2Q6ZVN8 426 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 RFX6Q8HWS3 928 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 KCTD6Q8NC69 237 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 CFAP61Q8NHU2 1237 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 FBXO27Q8NI29 283 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SPATA18Q8TC71 538 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 RXFP2Q8WXD0 754 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 MECRQ9BV79 373 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 FRMD8P1Q9BZ68 369 aaPredicted RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 MMADHCQ9H3L0 296 aaPredicted RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 TMEM39AQ9NV64 488 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 STX18Q9P2W9 335 aaKnown RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 PCDHB7Q9Y5E2 793 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 IKBKGQ9Y6K9 419 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.85□□□□□ -0.99
TRIM55-204ENST00000353317 MYO7AQ13402 2215 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 CEP290O15078 2479 aa8.85□□□□□ -0.99
TRIM55-204ENST00000353317 C1QAP02745 245 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 FESP07332 822 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 CSF2RAP15509 400 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 TSHRP16473 764 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 AMPD1P23109 780 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 SLC11A1P49279 550 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 PGFP49763 221 aa8.84□□□□□ -0.99
TRIM55-204ENST00000353317 THOC5Q13769 683 aaKnown RBP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 HADHQ16836 314 aaKnown RBP8.84□□□□□ -0.99
TRIM55-204ENST00000353317 C11orf91Q3C1V1 193 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms