RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 F5H5T6 163 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 DCLK1O15075 740 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 CST8O60676 142 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 ERCC2P18074 760 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 EPHB2P29323 1055 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 RPS24P62847 133 aaKnown RBP19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 C5orf22Q49AR2 442 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 RWDD4Q6NW29 188 aaKnown RBP19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 VITQ6UXI7 678 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 NPNTQ6UXI9 565 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 VSIG1Q86XK7 387 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 FGF14Q92915 247 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 KXD1Q9BQD3 176 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 RPP25Q9BUL9 199 aaKnown RBP19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 NDFIP2Q9NV92 336 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 ZNF510Q9Y2H8 683 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 R3HDM2Q9Y2K5 976 aaKnown RBP19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 VCANP13611 3396 aa19.59■□□□□ 0.73
CHMP4A-201ENST00000347519 TFF2Q03403 129 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 MTA1Q13330 715 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 LONRF2Q1L5Z9 754 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 LEXMQ3ZCV2 418 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 NCBP2-AS2Q69YL0 99 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 SLC9A4Q6AI14 798 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 BBS12Q6ZW61 710 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 NLRP14Q86W24 1093 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 TP53INP2Q8IXH6 220 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 CPXM2Q8N436 756 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 PLD5Q8N7P1 536 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 BPIFB1Q8TDL5 484 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 HAUS1Q96CS2 278 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 ZFYVE19Q96K21 471 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 RPRD1AQ96P16 312 aaPredicted RBP19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 FAM118BQ9BPY3 351 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 KLC2Q9H0B6 622 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 EPS15L1Q9UBC2 864 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 SAE1Q9UBE0 346 aaPredicted RBP19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 PPARGC1AQ9UBK2 798 aaKnown RBP19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 ZNF212Q9UDV6 495 aa19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 ZFP37Q9Y6Q3 630 aaPredicted RBP19.58■□□□□ 0.73
CHMP4A-201ENST00000347519 NUP205Q92621 2012 aa19.58■□□□□ 0.72
CHMP4A-201ENST00000347519 C2CD4DB7Z1M9 353 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 PGRMC1O00264 195 aaKnown RBP19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 DAPK3O43293 454 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 PECAM1P16284 738 aaPredicted RBP19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 CETN2P41208 172 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 ZNF135P52742 658 aaPredicted RBP19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 TRIM68Q6AZZ1 485 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 LRRC31Q6UY01 552 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 NPWQ8N729 165 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 AP1M1Q9BXS5 423 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 MAK16Q9BXY0 300 aaKnown RBP19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 ZYG11BQ9C0D3 744 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 ZFP14Q9HCL3 533 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 OBP2AQ9NY56 170 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 EFR3BQ9Y2G0 817 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 APOL1O14791 398 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 MAP3K6O95382 1288 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 GBE1Q04446 702 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 SLC10A2Q12908 348 aaPredicted RBP19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 GRM2Q14416 872 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 C1orf228Q6PIY5 440 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 TPGS1Q6ZTW0 290 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 OTOP3Q7RTS5 596 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 TFAP2DQ7Z6R9 452 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 TMEM25Q86YD3 366 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 CCDC33Q8N5R6 958 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 TDRD5Q8NAT2 981 aaKnown RBP19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 DDX50Q9BQ39 737 aaKnown RBP19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 STIM2Q9P246 746 aa19.57■□□□□ 0.72
CHMP4A-201ENST00000347519 WASH4PA8MWX3 477 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 MFSD11O43934 449 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 TBL1XO60907 577 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 TJP3O95049 919 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 ARSAP15289 507 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 RHOQP17081 205 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 HTR7P34969 479 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 HTR4Q13639 388 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 TFDP2Q14188 446 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 PAFAH1B3Q15102 231 aaKnown RBP19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 SMAD2Q15796 467 aaKnown RBP19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 WHAMMP3Q1A5X7 153 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 EML3Q32P44 896 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 ACBD5Q5T8D3 534 aaPredicted RBP19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 MFSD6LQ8IWD5 586 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 RTL3Q8N8U3 475 aaKnown RBP19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 PRELID2Q8N945 189 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 OSCP1Q8WVF1 389 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 RSAD2Q8WXG1 361 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 BHMTQ93088 406 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 ELSPBP1Q96BH3 223 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 L2HGDHQ9H9P8 463 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 DUS2Q9NX74 493 aaKnown RBP19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 PLK2Q9NYY3 685 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 TBC1D14Q9P2M4 693 aa19.56■□□□□ 0.72
CHMP4A-201ENST00000347519 COL4A3Q01955 1670 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 ANHXE9PGG2 379 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 IL9P15248 144 aa19.55■□□□□ 0.72
CHMP4A-201ENST00000347519 RABGAP1LQ5R372 815 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms