RNA–Protein interactions for RNA: ENST00000343253.11

CCDC18-201, Transcript of coiled-coil domain containing 18, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC18, Length 4,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-201ENST00000343253 SH3BP4Q9P0V3 963 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 TBX20Q9UMR3 447 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 PIN4Q9Y237 131 aaKnown RBP11.07□□□□□ -0.64
CCDC18-201ENST00000343253 PCDHGC5Q9Y5F6 944 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 ASB14A6NK59 587 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 CCDC166P0CW27 439 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 DARSP14868 501 aaKnown RBP11.07□□□□□ -0.64
CCDC18-201ENST00000343253 ITGALP20701 1170 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 CCNG1P51959 295 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 CDH17Q12864 832 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 GRIK3Q13003 919 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 SPANXN3Q5MJ09 141 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 XRRA1Q6P2D8 792 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 RNF19BQ6ZMZ0 732 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 EIF3MQ7L2H7 374 aaKnown RBP11.07□□□□□ -0.64
CCDC18-201ENST00000343253 TTC30AQ86WT1 665 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 DCP1BQ8IZD4 617 aaKnown RBP11.07□□□□□ -0.64
CCDC18-201ENST00000343253 FBXO39Q8N4B4 442 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 OR56A4Q8NGH8 313 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 PPP1R14AQ96A00 147 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 Q96MT0 163 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 CINPQ9BW66 212 aaPredicted RBP11.07□□□□□ -0.64
CCDC18-201ENST00000343253 SEMA6BQ9H3T3 888 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 TDRD3Q9H7E2 651 aaKnown RBP11.07□□□□□ -0.64
CCDC18-201ENST00000343253 GIN1Q9NXP7 522 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 ZNF180Q9UJW8 692 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 NPTXRO95502 500 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 TSHRP16473 764 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 PGAM1P18669 254 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 ACAT1P24752 427 aaKnown RBP11.07□□□□□ -0.64
CCDC18-201ENST00000343253 GRIA3P42263 894 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 IDH2P48735 452 aaKnown RBP11.07□□□□□ -0.64
CCDC18-201ENST00000343253 RPS6KA3P51812 740 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 SLC25A3Q00325 362 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 EGFLAMQ63HQ2 1017 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 FAM196AQ6ZSG2 479 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 SLFN11Q7Z7L1 901 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 ATP6V0D2Q8N8Y2 350 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 ZNF221Q9UK13 617 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 PADI4Q9UM07 663 aa11.07□□□□□ -0.64
CCDC18-201ENST00000343253 NCF1BA6NI72 391 aaPredicted RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ERI2A8K979 691 aaKnown RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 NCF1CA8MVU1 366 aaPredicted RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ATP6V1G1O75348 118 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 PIGNO95427 931 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ABHD2P08910 425 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 NCF1P14598 390 aaPredicted RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ZNF12P17014 697 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 NOS3P29474 1203 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 NPY2RP49146 381 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 OLR1P78380 273 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 SPP2Q13103 211 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 GRB10Q13322 594 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 CCNIQ14094 377 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 STX12Q86Y82 276 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 COLGALT1Q8NBJ5 622 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 MCFD2Q8NI22 146 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 RP9Q8TA86 221 aaKnown RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 PHF21BQ96EK2 531 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 SH2D3AQ9BRG2 576 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 TARS2Q9BW92 718 aaKnown RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 PFDN2Q9UHV9 154 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ERGIC3Q9Y282 383 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 GMPPBQ9Y5P6 360 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 GAS2O43903 313 aaKnown RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 COX4I1P13073 169 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 FAM187BQ17R55 369 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 INTS11Q5TA45 600 aaKnown RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 MOXD1Q6UVY6 613 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 HIPK1Q86Z02 1210 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 PDPRQ8NCN5 879 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 EEF1AKMT1Q8WVE0 214 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 CITED4Q96RK1 184 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 MNTQ99583 582 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 SPAG4Q9NPE6 437 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 NMRK2Q9NPI5 230 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 MIEF1Q9NQG6 463 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 AHSPQ9NZD4 102 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 SRP68Q9UHB9 627 aaKnown RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 MADDQ8WXG6 1647 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ADCY10Q96PN6 1610 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 GSAPA4D1B5 854 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 DDX3XO00571 662 aaKnown RBP eCLIP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 CYP2C9P11712 490 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 LBPP18428 481 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ETFBP38117 255 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 RAP1GAPP47736 663 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 AP1S2P56377 157 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 PSME3P61289 254 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 TUBA3CQ13748 450 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 PRR5LQ6MZQ0 368 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 SLC25A24Q6NUK1 477 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ATG9AQ7Z3C6 839 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 PQLC1Q8N2U9 271 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 METTL6Q8TCB7 284 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 FAM172AQ8WUF8 416 aa11.06□□□□□ -0.64
CCDC18-201ENST00000343253 NSUN4Q96CB9 384 aaKnown RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 L3MBTL3Q96JM7 780 aaPredicted RBP11.06□□□□□ -0.64
CCDC18-201ENST00000343253 ACOX2Q99424 681 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms