RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 STX16-NPEPL1H3BU86 382 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SCGB2A1O75556 95 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DNTTP04053 509 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ALPPP05187 535 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 GYS1P13807 737 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 RRM2P31350 389 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MAGEA10P43363 369 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 BLKP51451 505 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 USP11P51784 963 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TSNQ15631 228 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MROH9Q5TGP6 573 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 EPM2AIP1Q7L775 607 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SPATA21Q7Z572 469 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 KRT77Q7Z794 578 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 LONP2Q86WA8 852 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 STK40Q8N2I9 435 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 LZTR1Q8N653 840 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 C19orf18Q8NEA5 215 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 KBTBD8Q8NFY9 601 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TBC1D16Q8TBP0 767 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ZNF296Q8WUU4 475 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TEKT5Q96M29 485 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 OSBPL8Q9BZF1 889 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 RSAD1Q9HA92 442 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SYTL2Q9HCH5 934 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 NGRNQ9NPE2 291 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DAPK2Q9UIK4 370 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 CAPN11Q9UMQ6 739 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TMX2Q9Y320 296 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PCDHGB6Q9Y5F9 930 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TLL2Q9Y6L7 1015 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ANXA9O76027 345 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 OXSR1O95747 527 aaPredicted RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TRIM49P0CI25 452 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TRIM49CP0CI26 452 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TGFB3P10600 412 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MXI1P50539 228 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 CYP51A1Q16850 503 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 BOLA3Q53S33 107 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 KIAA0408Q6ZU52 694 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 STOX1Q6ZVD7 989 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 FRMD5Q7Z6J6 570 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SLC30A8Q8IWU4 369 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 KBTBD2Q8IY47 623 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PNMA1Q8ND90 353 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TSTD1Q8NFU3 115 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MCOLN3Q8TDD5 553 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DENND1AQ8TEH3 1009 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PABPC5Q96DU9 382 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 FSD1LQ9BXM9 530 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 CIPCQ9C0C6 399 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 CYP4F11Q9HBI6 524 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ADA2Q9NZK5 511 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 CCDC59Q9P031 241 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DMTF1Q9Y222 760 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SHROOM3Q8TF72 1996 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PLXNB2O15031 1838 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SEC16AO15027 2179 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 FAM92AA1XBS5 289 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 MATN2O00339 956 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DNM1LO00429 736 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PHF2O75151 1096 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 GUCA1CO95843 209 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PRLP01236 227 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SLC2A4P14672 509 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ADD1P35611 737 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 HALP42357 657 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 INTS5Q6P9B9 1019 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 BORAQ6PGQ7 559 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 RAPH1Q70E73 1250 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 DGLUCYQ7Z3D6 616 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 FERMT3Q86UX7 667 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TMEM126BQ8IUX1 230 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SPAG16Q8N0X2 631 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 CAMKK1Q8N5S9 505 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 LARP6Q9BRS8 491 aaKnown RBP3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TCEAL7Q9BRU2 100 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 PRRG4Q9BZD6 226 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 ZFYVE1Q9HBF4 777 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 SEC31BQ9NQW1 1179 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 TRPM5Q9NZQ8 1165 aa3.36□□□□□ -1.87
CSMD3-202ENST00000339701 A0A0A0MRY4 1105 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 PIPSLA2A3N6 862 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 KCNK3O14649 394 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 CASKO14936 926 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 IFNB1P01574 187 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 PDGFRBP09619 1106 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 JUNDP17535 347 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 GTF2H1P32780 548 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 SLC11A2P49281 568 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 LMAN2Q12907 356 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 ACVR2BQ13705 512 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 FAM110CQ1W6H9 321 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 ZNF280DQ6N043 979 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 TRIM59Q8IWR1 403 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 CACTIN-AS1Q8N1I8 211 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 DNAJC9Q8WXX5 260 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 DCBLD2Q96PD2 775 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 MRI1Q9BV20 369 aa3.35□□□□□ -1.87
CSMD3-202ENST00000339701 EPN3Q9H201 632 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms