RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 EPHX3Q9H6B9 360 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 KCNK13Q9HB14 408 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 NPHS2Q9NP85 383 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.11□□□□□ -0.63
RTN3-201ENST00000338850 ETNK2Q9NVF9 386 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 TJP2Q9UDY2 1190 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 RAPGEFL1Q9UHV5 662 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 GGT7Q9UJ14 662 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 HAO1Q9UJM8 370 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 TSPAN16Q9UKR8 245 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 CORO1CQ9ULV4 474 aaPredicted RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 GINS2Q9Y248 185 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 L3MBTL1Q9Y468 752 aa11.11□□□□□ -0.63
RTN3-201ENST00000338850 MRPL42Q9Y6G3 142 aaKnown RBP11.11□□□□□ -0.63
RTN3-201ENST00000338850 SCN1AP35498 2009 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 GRXCR2A6NFK2 248 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 H7C0C1 242 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 B4GALT5O43286 388 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 SNNO75324 88 aaPredicted RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 KRT19P08727 400 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 IL9P15248 144 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 ATP6V1C1P21283 382 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 ACADSBP45954 432 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 RAP1GAPP47736 663 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 ATP5OP48047 213 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 BCAR1P56945 870 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 MRPS35P82673 323 aaKnown RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 SARNPP82979 210 aaKnown RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 GAD2Q05329 585 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 WASHC5Q12768 1159 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 CAMK1Q14012 370 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 KRT81Q14533 505 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 ZRSR2Q15696 482 aaKnown RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 INSCQ1MX18 579 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 TSNAXIP1Q2TAA8 658 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 CCDC14Q49A88 953 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 TEX44Q53QW1 395 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 KCNT1Q5JUK3 1230 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 TRNP1Q6NT89 227 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 FAM43BQ6ZT52 329 aaPredicted RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 LONP2Q86WA8 852 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 CEP120Q8N960 986 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 SLC35F5Q8WV83 523 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 HSPH1Q92598 858 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 TTC17Q96AE7 1141 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 NAF1Q96HR8 494 aaKnown RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 SERAC1Q96JX3 654 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 NLRP4Q96MN2 994 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 SRPK1Q96SB4 655 aaKnown RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 EBNA1BP2Q99848 306 aaKnown RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 TMEM120AQ9BXJ8 343 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 NRDE2Q9H7Z3 1164 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 SLC17A7Q9P2U7 560 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 ZC3H7BQ9UGR2 993 aaKnown RBP11.1□□□□□ -0.63
RTN3-201ENST00000338850 STK38LQ9Y2H1 464 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 RAD54BQ9Y620 910 aa11.1□□□□□ -0.63
RTN3-201ENST00000338850 A8MUI8 341 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 TRIM49D1C9J1S8 452 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 E5RJQ4 531 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 GOLGA8MH3BSY2 632 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 BANF1O75531 89 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 RFPL1O75677 317 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 STK10O94804 968 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 CYP3A5P20815 502 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 LTBRP36941 435 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 GATMP50440 423 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 ZNF135P52742 658 aaPredicted RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 NDST1P52848 882 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 CRYBB1P53674 252 aaPredicted RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 AIF1P55008 147 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 YWHAGP61981 247 aaKnown RBP eCLIP11.09□□□□□ -0.63
RTN3-201ENST00000338850 HYAL1Q12794 435 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 LBRQ14739 615 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 KIZQ2M2Z5 673 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 PUS10Q3MIT2 529 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 DNAL1Q4LDG9 190 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 PAN2Q504Q3 1202 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 OR6B2Q6IFH4 312 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 ZNF534Q76KX8 674 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 LIMS2Q7Z4I7 341 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 MTDHQ86UE4 582 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 CAND1Q86VP6 1230 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 IGDCC3Q8IVU1 814 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 LMNTD2Q8IXW0 634 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 PCDH19Q8TAB3 1148 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 PTPRN2Q92932 1015 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 ISL2Q96A47 359 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 OXNAD1Q96HP4 312 aaPredicted RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 SIGLEC10Q96LC7 697 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 HSFY1Q96LI6 401 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 HEXIM2Q96MH2 286 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 ACAP3Q96P50 834 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 OLFM3Q96PB7 478 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 NUDCD1Q96RS6 583 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 OSMRQ99650 979 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 MIPEPQ99797 713 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 CCDC28BQ9BUN5 200 aa11.09□□□□□ -0.63
RTN3-201ENST00000338850 SNRNP25Q9BV90 132 aaKnown RBP11.09□□□□□ -0.63
RTN3-201ENST00000338850 CADM1Q9BY67 442 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms