RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CDKL3Q8IVW4 592 aaPredicted RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZNF683Q8IZ20 524 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 AENQ8WTP8 325 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 WBP2Q969T9 261 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GDAP1L1Q96MZ0 367 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PRMT1Q99873 361 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 USP29Q9HBJ7 922 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GRHL1Q9NZI5 618 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DNMT3BQ9UBC3 853 aaKnown RBP15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CDH23Q9H251 3354 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NOTCH4Q99466 2003 aa15.19■□□□□ 0.02
CDK5RAP3-201ENST00000338399 KCNN4O15554 427 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ACSL4O60488 711 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 OLFM2O95897 454 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 KLKB1P03952 638 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HNRNPA1P09651 372 aaKnown RBP eCLIP15.18■□□□□ 0.028e-6■□□□□ 10.1
CDK5RAP3-201ENST00000338399 CORO1AP31146 461 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SERPINB6P35237 376 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CCR2P41597 374 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NRIP1P48552 1158 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PLTPP55058 493 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MTA1Q13330 715 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SLC45A4Q5BKX6 768 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 STXBP5Q5T5C0 1151 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FBXL22Q6P050 247 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CHSY1Q86X52 802 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 EIF1ADQ8N9N8 165 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SNF8Q96H20 258 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZFRQ96KR1 1074 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 QKIQ96PU8 341 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 LGMNQ99538 433 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PCDH9Q9HC56 1237 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DPP7Q9UHL4 492 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SHROOM3Q8TF72 1996 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CFAP69A5D8W1 941 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 XYLBO75191 536 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RHOP08100 348 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FAM153BP0C7A2 387 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TACR2P21452 398 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SLC11A2P49281 568 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 IRAK1P51617 712 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SMAD3P84022 425 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 GPS1Q13098 491 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CALCOCO2Q13137 446 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PDK1Q15118 436 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FAM153CQ494X1 144 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZDHHC24Q6UX98 284 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CCNYQ8ND76 341 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CCHCR1Q8TD31 782 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TFB1MQ8WVM0 346 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 IGSF8Q969P0 613 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TIFAQ96CG3 184 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TCEAL4Q96EI5 215 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CELF6Q96J87 481 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZYG11BQ9C0D3 744 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PRDM12Q9H4Q4 367 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZDHHC18Q9NUE0 388 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NDFIP2Q9NV92 336 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 WHRNQ9P202 907 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PPARGC1AQ9UBK2 798 aaKnown RBP15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FAM153AQ9UHL3 310 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CPQQ9Y646 472 aa15.18■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CCDC195A0A1B0GUA6 201 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HACD1B0YJ81 288 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CNTN5O94779 1100 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 CKMP06732 381 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ITIH2P19823 946 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SLC6A4P31645 630 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RPL22P35268 128 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 EPHA5P54756 1037 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZXDBP98169 803 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 AP1B1Q10567 949 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 DUSP6Q16828 381 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 P3H1Q32P28 736 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ACBD5Q5T8D3 534 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RFWD3Q6PCD5 774 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RTL3Q8N8U3 475 aaKnown RBP15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 SHKBP1Q8TBC3 707 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FBXO25Q8TCJ0 367 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 MYEOVQ96EZ4 313 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RPRD1AQ96P16 312 aaPredicted RBP15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PRKD2Q9BZL6 878 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 KLC2Q9H0B6 622 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ZDHHC7Q9NXF8 308 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 RAD54BQ9Y620 910 aa15.17■□□□□ 0.02
CDK5RAP3-201ENST00000338399 IGLV3-10A0A075B6K4 115 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TRAV19A0A0A6YYK7 116 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 F5H5T6 163 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 PPP1R12AO14974 1030 aaPredicted RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 VAV1P15498 845 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ITGA8P53708 1063 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NTHL1P78549 312 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 ALFQ53S48 1182 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 FAM133BQ5BKY9 247 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 IZUMO3Q5VZ72 239 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 HEATR6Q6AI08 1181 aaKnown RBP15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TFAP2DQ7Z6R9 452 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 NLRP14Q86W24 1093 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 LGI2Q8N0V4 545 aa15.16■□□□□ 0.02
CDK5RAP3-201ENST00000338399 TAB3Q8N5C8 712 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms