RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CCDC181Q5TID7 509 aa22.18■■□□□ 1.14
TPM1-204ENST00000334895 PPARGC1AQ9UBK2 798 aaKnown RBP22.18■■□□□ 1.14
TPM1-204ENST00000334895 ZNF510Q9Y2H8 683 aa22.18■■□□□ 1.14
TPM1-204ENST00000334895 KIF26AQ9ULI4 1882 aaPredicted RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 F5H5T6 163 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 MBTPS2O43462 519 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 CNTN5O94779 1100 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 TJP3O95049 919 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 LAMP2P13473 410 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 GBP2P32456 591 aaPredicted RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 HTR7P34969 479 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 SMAD4Q13485 552 aaKnown RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 LEXMQ3ZCV2 418 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 ALFQ53S48 1182 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 NCBP2-AS2Q69YL0 99 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 RWDD4Q6NW29 188 aaKnown RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 ZNF572Q7Z3I7 529 aaPredicted RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 AP1M1Q9BXS5 423 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 MAK16Q9BXY0 300 aaKnown RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 ZNF212Q9UDV6 495 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 R3HDM2Q9Y2K5 976 aaKnown RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 RPS24P62847 133 aaKnown RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 TFDP2Q14188 446 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 TANGO2Q6ICL3 276 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 LRRC31Q6UY01 552 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 NLRP14Q86W24 1093 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 CIR1Q86X95 450 aaPredicted RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 CFAP52Q8N1V2 620 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 CPXM2Q8N436 756 aa22.17■■□□□ 1.14
TPM1-204ENST00000334895 RPRD1AQ96P16 312 aaPredicted RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 SAE1Q9UBE0 346 aaPredicted RBP22.17■■□□□ 1.14
TPM1-204ENST00000334895 APOL1O14791 398 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 DAPK3O43293 454 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 TSPAN3O60637 253 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 PECAM1P16284 738 aaPredicted RBP22.16■■□□□ 1.14
TPM1-204ENST00000334895 PAFAH1B1P43034 410 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 NPNTQ6UXI9 565 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 NPWQ8N729 165 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 PRELID2Q8N945 189 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.16■■□□□ 1.14
TPM1-204ENST00000334895 HAUS1Q96CS2 278 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 DDX50Q9BQ39 737 aaKnown RBP22.16■■□□□ 1.14
TPM1-204ENST00000334895 ZYG11BQ9C0D3 744 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 KLC2Q9H0B6 622 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 LINC00597Q9H2U6 94 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 NDFIP2Q9NV92 336 aa22.16■■□□□ 1.14
TPM1-204ENST00000334895 ZFP37Q9Y6Q3 630 aaPredicted RBP22.16■■□□□ 1.14
TPM1-204ENST00000334895 HEPACAM2A8MVW5 462 aa22.15■■□□□ 1.14
TPM1-204ENST00000334895 FGF10O15520 208 aaPredicted RBP22.15■■□□□ 1.14
TPM1-204ENST00000334895 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.15■■□□□ 1.14
TPM1-204ENST00000334895 NAP1L3Q99457 506 aaPredicted RBP22.15■■□□□ 1.14
TPM1-204ENST00000334895 FAM118BQ9BPY3 351 aa22.15■■□□□ 1.14
TPM1-204ENST00000334895 OBP2AQ9NY56 170 aa22.15■■□□□ 1.14
TPM1-204ENST00000334895 WNT6Q9Y6F9 365 aa22.15■■□□□ 1.14
TPM1-204ENST00000334895 WASH4PA8MWX3 477 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 MFSD11O43934 449 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 RHOQP17081 205 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 SP100P23497 879 aaPredicted RBP22.14■■□□□ 1.14
TPM1-204ENST00000334895 GBE1Q04446 702 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 CKAP4Q07065 602 aaKnown RBP22.14■■□□□ 1.14
TPM1-204ENST00000334895 SLC10A2Q12908 348 aaPredicted RBP22.14■■□□□ 1.14
TPM1-204ENST00000334895 PAFAH1B3Q15102 231 aaKnown RBP22.14■■□□□ 1.14
TPM1-204ENST00000334895 PTCRAQ6ISU1 281 aaPredicted RBP22.14■■□□□ 1.14
TPM1-204ENST00000334895 C1orf228Q6PIY5 440 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 TP53INP2Q8IXH6 220 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 RTL3Q8N8U3 475 aaKnown RBP22.14■■□□□ 1.14
TPM1-204ENST00000334895 NETO2Q8NC67 525 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 LRRN4CLQ8ND94 238 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 SPATA4Q8NEY3 305 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 BPIFB1Q8TDL5 484 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 ASIC4Q96FT7 647 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 CARD6Q9BX69 1037 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 CATSPERBQ9H7T0 1116 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 ZFP14Q9HCL3 533 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 STIM2Q9P246 746 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 EPS15L1Q9UBC2 864 aa22.14■■□□□ 1.14
TPM1-204ENST00000334895 APOC4-APOC2K7ER74 178 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 KRIT1O00522 736 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 APOC2P02655 101 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 TGM2P21980 687 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 PARM1Q6UWI2 310 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 TMCO3Q6UWJ1 677 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 VITQ6UXI7 678 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 TFAP2DQ7Z6R9 452 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 KIAA1958Q8N8K9 716 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 TDRD5Q8NAT2 981 aaKnown RBP22.13■■□□□ 1.13
TPM1-204ENST00000334895 ACTL9Q8TC94 416 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 C1orf54Q8WWF1 131 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 ATXN2LQ8WWM7 1075 aaKnown RBP22.13■■□□□ 1.13
TPM1-204ENST00000334895 ATG4AQ8WYN0 398 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 FGF14Q92915 247 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 PLA2G2FQ9BZM2 168 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 PRDM16Q9HAZ2 1276 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 RBM12Q9NTZ6 932 aaKnown RBP22.13■■□□□ 1.13
TPM1-204ENST00000334895 TMEM248Q9NWD8 314 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 VCANP13611 3396 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 MYOFQ9NZM1 2061 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 MAP3K6O95382 1288 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 IL9P15248 144 aa22.13■■□□□ 1.13
TPM1-204ENST00000334895 ZFXP17010 805 aaPredicted RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms