RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 DACT3Q96B18 629 aaPredicted RBP15.35■□□□□ 0.05
C9orf47-201ENST00000334490 NOP53Q9NZM5 478 aaKnown RBP15.35■□□□□ 0.05
C9orf47-201ENST00000334490 CES2O00748 559 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 CAND2O75155 1236 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 ALOX15P16050 662 aaPredicted RBP15.35■□□□□ 0.05
C9orf47-201ENST00000334490 SOAT1P35610 550 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 GP5P40197 560 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 AADACL2Q6P093 401 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 NPNTQ6UXI9 565 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 SERPINA13PQ6UXR4 307 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 CMTM5Q96DZ9 223 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 KREMEN1Q96MU8 473 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 PRDM16Q9HAZ2 1276 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 IL1RL2Q9HB29 575 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 SFMBT1Q9UHJ3 866 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 FBXO10Q9UK96 956 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 ITM2BQ9Y287 266 aa15.35■□□□□ 0.05
C9orf47-201ENST00000334490 ZSCAN9O15535 394 aaPredicted RBP15.34■□□□□ 0.05
C9orf47-201ENST00000334490 GRK3P35626 688 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 DPYSL3Q14195 570 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 TRIML2Q8N7C3 387 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 PNMA8BQ9ULN7 279 aaPredicted RBP15.34■□□□□ 0.05
C9orf47-201ENST00000334490 FAM32AQ9Y421 112 aaKnown RBP15.34■□□□□ 0.05
C9orf47-201ENST00000334490 DYRK1BQ9Y463 629 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 DGKIO75912 1065 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 GNRH1P01148 92 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 DMTNQ08495 405 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 TAF10Q12962 218 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 PARP6Q2NL67 630 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 ZNF333Q96JL9 665 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 RNF157Q96PX1 679 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 BBS2Q9BXC9 721 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 CTNNAL1Q9UBT7 734 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 ADAM28Q9UKQ2 775 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 GOLGA8TH3BQL2 631 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 OPLAHO14841 1288 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 LGR5O75473 907 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 CLCNKBP51801 687 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 SMARCB1Q12824 385 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 PPP4R4Q6NUP7 873 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 IRF2BP2Q7Z5L9 587 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 B3GNT5Q9BYG0 378 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 PRDM12Q9H4Q4 367 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 SCOCQ9UIL1 159 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 CICQ96RK0 1608 aaPredicted RBP15.34■□□□□ 0.05
C9orf47-201ENST00000334490 FAM95CA0A1B0GW59 222 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 EVPLLA8MZ36 301 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 C22orf31O95567 290 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 ZSCAN5DPP0CG00 497 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 SNRPD1P62314 119 aaKnown RBP15.34■□□□□ 0.05
C9orf47-201ENST00000334490 VSTM1Q6UX27 236 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 MAB21L3Q8N8X9 362 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 NRBF2Q96F24 287 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 NRDE2Q9H7Z3 1164 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 YY1AP1Q9H869 796 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 RGS18Q9NS28 235 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 THEGQ9P2T0 379 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 SLC45A1Q9Y2W3 748 aa15.34■□□□□ 0.05
C9orf47-201ENST00000334490 CPA3P15088 417 aa15.33■□□□□ 0.05
C9orf47-201ENST00000334490 ERCC2P18074 760 aa15.33■□□□□ 0.05
C9orf47-201ENST00000334490 PGAM1P18669 254 aa15.33■□□□□ 0.05
C9orf47-201ENST00000334490 CDC25CP30307 473 aa15.33■□□□□ 0.05
C9orf47-201ENST00000334490 INPP1P49441 399 aa15.33■□□□□ 0.05
C9orf47-201ENST00000334490 IRF2BP1Q8IU81 584 aa15.33■□□□□ 0.05
C9orf47-201ENST00000334490 ACTR8Q9H981 624 aa15.33■□□□□ 0.05
C9orf47-201ENST00000334490 ZMYND8Q9ULU4 1186 aaPredicted RBP15.33■□□□□ 0.05
C9orf47-201ENST00000334490 CFAP73A6NFT4 308 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 HNRNPCL1O60812 293 aaKnown RBP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 FKBP9O95302 570 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 GOT1P17174 413 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 HALP42357 657 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 NPY5RQ15761 445 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 FKBP9P1Q75LS8 142 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 NPAS4Q8IUM7 802 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 HJURPQ8NCD3 748 aaPredicted RBP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 SCLYQ96I15 445 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 COPS7BQ9H9Q2 264 aaPredicted RBP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 A0A0A0MRY4 1105 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 SERPINH1P50454 418 aaKnown RBP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 TLE2Q04725 743 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 USP45Q70EL2 814 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 SPATA13Q96N96 652 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 OMDQ99983 421 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 GID8Q9NWU2 228 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 TAS2R13Q9NYV9 303 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 NAALADL1Q9UQQ1 740 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 EIF3LQ9Y262 564 aaKnown RBP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 B2RBV5 119 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 IGF2BP3O00425 579 aaKnown RBP eCLIP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 C4BPAP04003 597 aaKnown RBP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 TPBGLP0DKB5 382 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 PSMB4P28070 264 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 ARHGAP1Q07960 439 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 MMRN1Q13201 1228 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 INPP5AQ14642 412 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 DNAL1Q4LDG9 190 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 SETMARQ53H47 684 aaPredicted RBP15.33■□□□□ 0.04
C9orf47-201ENST00000334490 MFSD4BQ5TF39 518 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 DAB2IPQ5VWQ8 1189 aa15.33■□□□□ 0.04
C9orf47-201ENST00000334490 PDPK2PQ6A1A2 396 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms