RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 EIF2AQ9BY44 585 aaKnown RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 CAB39LQ9H9S4 337 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 APOBEC2Q9Y235 224 aaKnown RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 A0A0A0MRY4 1105 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 CCDC78A2IDD5 438 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 CREB3O43889 395 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 FESP07332 822 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 CBLBQ13191 982 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 TAPT1Q6NXT6 567 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 SLC30A9Q6PML9 568 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 KYAT3Q6YP21 454 aaKnown RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 TIFABQ6ZNK6 161 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 HPS6Q86YV9 775 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 FAM149B1Q96BN6 582 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 SPATA13Q96N96 652 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 FCRL3Q96P31 734 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 C11orf84Q9BUA3 381 aaPredicted RBP12.65□□□□□ -0.38
VPS33B-201ENST00000333371 ADAMTS6Q9UKP5 1117 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 USP3Q9Y6I4 520 aa12.65□□□□□ -0.38
VPS33B-201ENST00000333371 MAGEA13PA6NCF6 341 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 DCXO43602 365 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 TYK2P29597 1187 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 PAPOLAP51003 745 aaKnown RBP12.64□□□□□ -0.39
VPS33B-201ENST00000333371 IRF9Q00978 393 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 CCNIQ14094 377 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 FAM187BQ17R55 369 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 SFT2D3Q587I9 215 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 STEAP4Q687X5 459 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 NAPRTQ6XQN6 538 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 FRMD7Q6ZUT3 714 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 ACVR1CQ8NER5 493 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 PPTC7Q8NI37 304 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 AGAP2Q99490 1192 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 G3BP2Q9UN86 482 aaKnown RBP12.64□□□□□ -0.39
VPS33B-201ENST00000333371 BRCA2P51587 3418 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 E9PBE3 544 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 ZNF195O14628 629 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 STRNO43815 780 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 KLHL41O60662 606 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 GLRA3O75311 464 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 DGKIO75912 1065 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 ALDH1A2O94788 518 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 GSTA2P09210 222 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 AKAP5P24588 427 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 CCR10P46092 362 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 ZRSR2Q15696 482 aaKnown RBP12.64□□□□□ -0.39
VPS33B-201ENST00000333371 EFHC1Q5JVL4 640 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 PDPK2PQ6A1A2 396 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 DEFB107AQ8IZN7 70 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 NME8Q8N427 588 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 MAPK15Q8TD08 544 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 OLFM3Q96PB7 478 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 NFKBIZQ9BYH8 718 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 ZCWPW1Q9H0M4 648 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 GOLGA2P5Q9HBQ8 144 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 S100A14Q9HCY8 104 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 KLK14Q9P0G3 267 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 KIAA1257Q9ULG3 409 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 RPS6KL1Q9Y6S9 549 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 GOLGA8TH3BQL2 631 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 ZBTB14O43829 449 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 PEX2P28328 305 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 COPAP53621 1224 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 ASPHQ12797 758 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 DEFB106AQ8N104 65 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 LINC01465Q8N7H1 131 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 ZNF781Q8N8C0 355 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 OR52K1Q8NGK4 314 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 SLC2A14Q8TDB8 520 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 CENPIQ92674 756 aaPredicted RBP12.64□□□□□ -0.39
VPS33B-201ENST00000333371 APOL2Q9BQE5 337 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 CDHR5Q9HBB8 845 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
VPS33B-201ENST00000333371 GOLGA8QA0A0J9YX86 632 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 GOLGA8OA6NCC3 632 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 GOLGA8NF8WBI6 632 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 SPTLC1O15269 473 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 AHCYL1O43865 530 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 AMHP03971 560 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 SERPINE1P05121 402 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 RALBP11234 206 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 TKTP29401 623 aaKnown RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 PTPN9P43378 593 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 NDUFV1P49821 464 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 CUL3Q13618 768 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 SLC9B1Q4ZJI4 515 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 DCAF6Q58WW2 860 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 CTU1Q7Z7A3 348 aaKnown RBP12.63□□□□□ -0.39
VPS33B-201ENST00000333371 ZNF567Q8N184 647 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 DCLK2Q8N568 766 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 ADAM32Q8TC27 787 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 BRI3BPQ8WY22 251 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 MS4A4AQ96JQ5 239 aa12.63□□□□□ -0.39
VPS33B-201ENST00000333371 FAM49AQ9H0Q0 323 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms