RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 KCNJ2P63252 427 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 TUSC3Q13454 348 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 BSPRYQ5W0U4 402 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 CCSAPQ6IQ19 270 aaPredicted RBP17.87■□□□□ 0.45
DDX28-201ENST00000332395 TLDC1Q6P9B6 456 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 UNC5BQ8IZJ1 945 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 ARNTL2Q8WYA1 636 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 KLHL29Q96CT2 875 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 PKMYT1Q99640 499 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 TSSK1BQ9BXA7 367 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 TKTL2Q9H0I9 626 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 KLHL8Q9P2G9 620 aaPredicted RBP17.87■□□□□ 0.45
DDX28-201ENST00000332395 DSEQ9UL01 958 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 PLLPQ9Y342 182 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 CEP350Q5VT06 3117 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.87■□□□□ 0.45
DDX28-201ENST00000332395 NCAM2O15394 837 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 ZNF189O75820 626 aaPredicted RBP17.87■□□□□ 0.45
DDX28-201ENST00000332395 NQO1P15559 274 aaKnown RBP17.87■□□□□ 0.45
DDX28-201ENST00000332395 PGAM1P18669 254 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 BGNP21810 368 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 PTPN3P26045 913 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 SKIV2L2P42285 1042 aaKnown RBP17.87■□□□□ 0.45
DDX28-201ENST00000332395 PPIDQ08752 370 aaKnown RBP17.87■□□□□ 0.45
DDX28-201ENST00000332395 OVGP1Q12889 678 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 MROH9Q5TGP6 573 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 CCNJLQ8IV13 435 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 OR10T2Q8NGX3 314 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 ZNF398Q8TD17 642 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 RSPH1Q8WYR4 309 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 TMEM209Q96SK2 561 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 EPAS1Q99814 870 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 MKS1Q9NXB0 559 aa17.87■□□□□ 0.45
DDX28-201ENST00000332395 COL4A4P53420 1690 aaPredicted RBP17.86■□□□□ 0.45
DDX28-201ENST00000332395 C2CD2LO14523 706 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 UNC5CO95185 931 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 NEFHP12036 1026 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 PLEKHG4Q58EX7 1191 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 MARK2Q7KZI7 788 aaKnown RBP17.86■□□□□ 0.45
DDX28-201ENST00000332395 TAC4Q86UU9 113 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 SLC13A1Q9BZW2 595 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
DDX28-201ENST00000332395 SYBUQ9NX95 663 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 OR12D3Q9UGF7 316 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 NOD1Q9Y239 953 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.86■□□□□ 0.45
DDX28-201ENST00000332395 SNX10Q9Y5X0 201 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 ITGB1P05556 798 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 PRKAR2AP13861 404 aaKnown RBP17.86■□□□□ 0.45
DDX28-201ENST00000332395 ZNF135P52742 658 aaPredicted RBP17.86■□□□□ 0.45
DDX28-201ENST00000332395 NIPAL4Q0D2K0 466 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 CRYMQ14894 314 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 OVOS1Q6IE37 1185 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 ASRGL1Q7L266 308 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 LRRTM3Q86VH5 581 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 UROC1Q96N76 676 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 NAT9Q9BTE0 207 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 PCMTD2Q9NV79 361 aa17.86■□□□□ 0.45
DDX28-201ENST00000332395 LRIG2O94898 1065 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 ATP6V1G2O95670 118 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 YY1P25490 414 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 CNTFP26441 200 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 CST5P28325 142 aaPredicted RBP17.85■□□□□ 0.45
DDX28-201ENST00000332395 E2F5Q15329 346 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 NLRP9Q7RTR0 991 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 SCML4Q8N228 414 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 KIF2BQ8N4N8 673 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 SMC1BQ8NDV3 1235 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 RFWD2Q8NHY2 731 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 CDKL2Q92772 493 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 HDAC11Q96DB2 347 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 GORASP1Q9BQQ3 440 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 TRIM55Q9BYV6 548 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 BRD8Q9H0E9 1235 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 ARHGEF3Q9NR81 526 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 TXLNGQ9NUQ3 528 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 DCTN4Q9UJW0 460 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 TRIM33Q9UPN9 1127 aa17.85■□□□□ 0.45
DDX28-201ENST00000332395 SKIP12755 728 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 MX2P20592 715 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 EPHB2P29323 1055 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 SERPINB6P35237 376 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 GALNT2Q10471 571 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 TIFABQ6ZNK6 161 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 THEM5Q8N1Q8 247 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 ARMC2Q8NEN0 867 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 DQX1Q8TE96 717 aaKnown RBP17.84■□□□□ 0.45
DDX28-201ENST00000332395 AGAP3Q96P47 875 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 SLC17A6Q9P2U8 582 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 ABT1Q9ULW3 272 aaKnown RBP17.84■□□□□ 0.45
DDX28-201ENST00000332395 F8W810 466 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 KLF11O14901 512 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 ELNP15502 786 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 PAX3P23760 479 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 CAP1Q01518 475 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 TSPY1Q01534 308 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 OLIG2Q13516 323 aa17.84■□□□□ 0.45
DDX28-201ENST00000332395 MAPRE1Q15691 268 aaKnown RBP17.84■□□□□ 0.45
DDX28-201ENST00000332395 TRIM71Q2Q1W2 868 aaKnown RBP17.84■□□□□ 0.45
DDX28-201ENST00000332395 ZNF598Q86UK7 904 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms