RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 BTBD8Q5XKL5 378 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 MSANTD2Q6P1R3 559 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 GPRIN1Q7Z2K8 1008 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 SCD5Q86SK9 330 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 PIGZQ86VD9 579 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 RASSF3Q86WH2 238 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 TTC30AQ86WT1 665 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 FAM114A1Q8IWE2 563 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 EZH1Q92800 747 aaPredicted RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 FAM46AQ96IP4 442 aaKnown RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 HSFY1Q96LI6 401 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 XPO6Q96QU8 1125 aaKnown RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 KRTAP9-9Q9BYP9 154 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 KRTAP9-4Q9BYQ2 154 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 SLC2A11Q9BYW1 496 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 NACA2Q9H009 215 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 CLSTN2Q9H4D0 955 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 THAP9Q9H5L6 903 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 MMRN2Q9H8L6 949 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 RBM12Q9NTZ6 932 aaKnown RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 OSER1Q9NX31 292 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 NCDNQ9UBB6 729 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 STOML1Q9UBI4 398 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 CHORDC1Q9UHD1 332 aaPredicted RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 FBXO10Q9UK96 956 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 TSPAN16Q9UKR8 245 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 STRIP2Q9ULQ0 834 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMG1-201ENST00000330588 HBS1LQ9Y450 684 aaKnown RBP6.63□□□□□ -1.35
SMG1-201ENST00000330588 DAAM1Q9Y4D1 1078 aa6.63□□□□□ -1.35
SMG1-201ENST00000330588 CACNA1IQ9P0X4 2223 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 CACNA1HO95180 2353 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 A0A1W2PQH9 124 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 K7EQS6 105 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 MED7O43513 233 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 SMNDC1O75940 238 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMG1-201ENST00000330588 STC2O76061 302 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 KAT7O95251 611 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 PENKP01210 267 aaPredicted RBP6.62□□□□□ -1.35
SMG1-201ENST00000330588 DPP6P42658 865 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 KIR2DL1P43626 348 aaPredicted RBP6.62□□□□□ -1.35
SMG1-201ENST00000330588 ACADSBP45954 432 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 TKTL1P51854 596 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 LMNB2Q03252 620 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 IFRD2Q12894 506 aaPredicted RBP6.62□□□□□ -1.35
SMG1-201ENST00000330588 BYSLQ13895 437 aaKnown RBP6.62□□□□□ -1.35
SMG1-201ENST00000330588 DMC1Q14565 340 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 EOGTQ5NDL2 527 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 C10orf120Q5SQS8 335 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 LY6G5CQ5SRR4 150 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 KLHL10Q6JEL2 608 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 ZDHHC13Q8IUH4 622 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 BBS7Q8IWZ6 715 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 PPM1KQ8N3J5 372 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 GPATCH11Q8N954 259 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 ZNF557Q8N988 423 aaPredicted RBP6.62□□□□□ -1.35
SMG1-201ENST00000330588 TERB1Q8NA31 727 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 RPLP0P6Q8NHW5 317 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 TTC8Q8TAM2 541 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 SLC35F5Q8WV83 523 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 ERCC4Q92889 916 aaPredicted RBP6.62□□□□□ -1.35
SMG1-201ENST00000330588 AZIN2Q96A70 460 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 ELMO3Q96BJ8 720 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 EEF2KMTQ96G04 330 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 CNOT6LQ96LI5 555 aaKnown RBP6.62□□□□□ -1.35
SMG1-201ENST00000330588 SRRTQ9BXP5 876 aaKnown RBP6.62□□□□□ -1.35
SMG1-201ENST00000330588 CEP41Q9BYV8 373 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 LRRC4Q9HBW1 653 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 ABCC13Q9NSE7 274 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 SMPD4Q9NXE4 827 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 STOML2Q9UJZ1 356 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 SLC27A6Q9Y2P4 619 aa6.62□□□□□ -1.35
SMG1-201ENST00000330588 F5P12259 2224 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 CPNE3O75131 537 aaKnown RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 ALDH1A2O94788 518 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 EPN2O95208 641 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 IGLV3-27P01718 113 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 HNRNPLP14866 589 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMG1-201ENST00000330588 FNTBP49356 437 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 LIMK1P53667 647 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 MFAP3P55082 362 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 DAOAP59103 153 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 YWHAGP61981 247 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMG1-201ENST00000330588 RING1Q06587 406 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 MTA1Q13330 715 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 SIM2Q14190 667 aaPredicted RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 PUM1Q14671 1186 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMG1-201ENST00000330588 EIF4HQ15056 248 aaKnown RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 CSRP2Q16527 193 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 GOLGA7BQ2TAP0 167 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 ZNF394Q53GI3 561 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 RNF43Q68DV7 783 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TRIM65Q6PJ69 517 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TSSK4Q6SA08 328 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 TMEM270Q6UE05 265 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 GBP6Q6ZN66 633 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 BHLHA9Q7RTU4 235 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 CACNA2D4Q7Z3S7 1137 aa6.61□□□□□ -1.35
SMG1-201ENST00000330588 RBBP8NLQ8NC74 664 aaPredicted RBP6.61□□□□□ -1.35
SMG1-201ENST00000330588 OLIG1Q8TAK6 271 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms