RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 CFL1P23528 166 aaKnown RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 CDK8P49336 464 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 DPYSQ14117 519 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 MESDQ14696 234 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 FAM47CQ5HY64 1035 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 IZUMO3Q5VZ72 239 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 FAM205BPQ63HN1 556 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 NLGN2Q8NFZ4 835 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 FAM111AQ96PZ2 611 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 NACC1Q96RE7 527 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 EBF4Q9BQW3 602 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 NPLQ9BXD5 320 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 WWP1Q9H0M0 922 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 RMND5AQ9H871 391 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 NANOGQ9H9S0 305 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 SSU72Q9NP77 194 aaKnown RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 PNPLA3Q9NST1 481 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 SEPT3Q9UH03 358 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 DNM3Q9UQ16 869 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 APOBEC2Q9Y235 224 aaKnown RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 USP17L5A8MUK1 530 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 POLR1CO15160 346 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 HDAC3O15379 428 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 TGFB1I1O43294 461 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 ENTPD3O75355 529 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 MCF2P10911 925 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 AOC1P19801 751 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 NMT1P30419 496 aaKnown RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 COPAP53621 1224 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 MLLT6P55198 1093 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 STX1BP61266 288 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 PRKCQQ04759 706 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 C19orf57Q0VDD7 668 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 RAB39AQ14964 217 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 TBCCQ15814 346 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 ZCCHC8Q6NZY4 707 aaKnown RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 POTEGQ6S5H5 508 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 DPP8Q6V1X1 898 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 BANPQ8N9N5 519 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF420Q8TAQ5 688 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 HM13Q8TCT9 377 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 TRIB2Q92519 343 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 C1orf50Q9BV19 199 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 STN1Q9H668 368 aaKnown RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 THG1LQ9NWX6 298 aaKnown RBP12.14□□□□□ -0.47
SHMT2-201ENST00000328923 STMN3Q9NZ72 180 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 ARHGAP26Q9UNA1 814 aa12.14□□□□□ -0.47
SHMT2-201ENST00000328923 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF839A8K0R7 811 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 ERVH48-1M5A8F1 160 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 CLPXO76031 633 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 ITGAXP20702 1163 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 CLCQ05315 142 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 STX3Q13277 289 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 MAPRE1Q15691 268 aaKnown RBP12.13□□□□□ -0.47
SHMT2-201ENST00000328923 UGT3A1Q6NUS8 523 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 IDO2Q6ZQW0 420 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 TMEM151BQ8IW70 566 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 LILRB2Q8N423 598 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-201ENST00000328923 HERVK_113Q902F9 699 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 OMA1Q96E52 524 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 GIMAP5Q96F15 307 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 CEP95Q96GE4 821 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 SP140LQ9H930 580 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 MAGEE1Q9HCI5 957 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 TRIM39Q9HCM9 518 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 SLC8A2Q9UPR5 921 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 H0YIN7 160 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 TRIM77I1YAP6 450 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 MEN1O00255 615 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 TBX3O15119 743 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 ZW10O43264 779 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 GPC4O75487 556 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 ZMPSTE24O75844 475 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 GCNT3O95395 438 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 SERPINA6P08185 405 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 MYL7Q01449 175 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 SPIRE1Q08AE8 756 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 IGSF11Q5DX21 431 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 CYP20A1Q6UW02 462 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 CCDC33Q8N5R6 958 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 MINDY2Q8NBR6 621 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 METTL2AQ96IZ6 378 aaKnown RBP12.13□□□□□ -0.47
SHMT2-201ENST00000328923 FAM118BQ9BPY3 351 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 NARFLQ9H6Q4 476 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 POLMQ9NP87 494 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-201ENST00000328923 C8orf4Q9NR00 106 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 DAGLAQ9Y4D2 1042 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 PPME1Q9Y570 386 aa12.13□□□□□ -0.47
SHMT2-201ENST00000328923 A0A087WXM4 84 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 TRIM64BA6NI03 449 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 BCL10O95999 233 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ICAM2P13598 275 aa12.12□□□□□ -0.47
SHMT2-201ENST00000328923 ZNF26P17031 533 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 MAP4P27816 1152 aaKnown RBP12.12□□□□□ -0.47
SHMT2-201ENST00000328923 NAMPTP43490 491 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms