RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 PPARGC1AQ9UBK2 798 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 TRHDEQ9UKU6 1024 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 GOLGA8MH3BSY2 632 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 RNF103O00237 685 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 CDH16O75309 829 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 CSH1P0DML2 217 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 CSH2P0DML3 217 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 ATP2A2P16615 1042 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 MAGEA3P43357 314 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 PPIGQ13427 754 aaKnown RBP eCLIP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 FASTKD3Q14CZ7 662 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 MSS51Q4VC12 460 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 DNAJC21Q5F1R6 531 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 NPWQ8N729 165 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 UHMK1Q8TAS1 419 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 EPS8L3Q8TE67 593 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 BTN2A3PQ96KV6 586 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 CNOT10Q9H9A5 744 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 XAB2Q9HCS7 855 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 MARCH2Q9P0N8 246 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 HBS1LQ9Y450 684 aaKnown RBP18.35■□□□□ 0.53
RAB39A-201ENST00000320578 SNX10Q9Y5X0 201 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 HS3ST4Q9Y661 456 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 TEX264Q9Y6I9 313 aa18.35■□□□□ 0.53
RAB39A-201ENST00000320578 MYO16Q9Y6X6 1858 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 TLDC2A0PJX2 215 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 URODP06132 367 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 GSTA2P09210 222 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 MAGOHP61326 146 aaKnown RBP18.34■□□□□ 0.53
RAB39A-201ENST00000320578 PPP2R2AP63151 447 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 HTRA4P83105 476 aaPredicted RBP18.34■□□□□ 0.53
RAB39A-201ENST00000320578 GAD2Q05329 585 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 CCDC13Q8IYE1 715 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 GPR152Q8TDT2 470 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 DPF3Q92784 378 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 TRMT2BQ96GJ1 504 aaKnown RBP18.34■□□□□ 0.53
RAB39A-201ENST00000320578 SIK2Q9H0K1 926 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 RETREG1Q9H6L5 497 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 EURLQ9NYK6 297 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 SSX2IPQ9Y2D8 614 aa18.34■□□□□ 0.53
RAB39A-201ENST00000320578 CLUHO75153 1309 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 E9PAM4 449 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 APRTP07741 180 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 PPP3CCP48454 512 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 EFEMP1Q12805 493 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 BBS9Q3SYG4 887 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 C10orf120Q5SQS8 335 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 AFMIDQ63HM1 303 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 CAND1Q86VP6 1230 aaKnown RBP18.33■□□□□ 0.53
RAB39A-201ENST00000320578 ZNF683Q8IZ20 524 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 RTL3Q8N8U3 475 aaKnown RBP18.33■□□□□ 0.53
RAB39A-201ENST00000320578 STKLD1Q8NE28 680 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 FBXO36Q8NEA4 188 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 GIPC2Q8TF65 315 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 YME1L1Q96TA2 773 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 CAPS2Q9BXY5 557 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 RXFP1Q9HBX9 757 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 SLC24A2Q9UI40 661 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 NUDT5Q9UKK9 219 aa18.33■□□□□ 0.53
RAB39A-201ENST00000320578 IGLV3-10A0A075B6K4 115 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 SRRM3A6NNA2 597 aaPredicted RBP18.33■□□□□ 0.52
RAB39A-201ENST00000320578 SRGAP2BP0DMP2 458 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 RPL17P18621 184 aaKnown RBP18.33■□□□□ 0.52
RAB39A-201ENST00000320578 CCNCP24863 283 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 PTPN3P26045 913 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 MMP13P45452 471 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 TUBP50607 506 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 GPX6P59796 221 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 LONRF1Q17RB8 773 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 RWDD4Q6NW29 188 aaKnown RBP18.33■□□□□ 0.52
RAB39A-201ENST00000320578 TAOK1Q7L7X3 1001 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 PALM2Q8IXS6 379 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 ZNF567Q8N184 647 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 WDR83Q9BRX9 315 aaKnown RBP18.33■□□□□ 0.52
RAB39A-201ENST00000320578 PCDHB12Q9Y5F1 795 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 ACTL7BQ9Y614 415 aa18.33■□□□□ 0.52
RAB39A-201ENST00000320578 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.33■□□□□ 0.52
RAB39A-201ENST00000320578 GREB1Q4ZG55 1949 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 TLR5O60602 858 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 LILRB3O75022 631 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 SEC24AO95486 1093 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 FGBP02675 491 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 ACRP10323 421 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 RHOQP17081 205 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 NR1H3Q13133 447 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 KLHL38Q2WGJ6 581 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 PIK3R6Q5UE93 754 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 NUGGCQ68CJ6 796 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 FAM117BQ6P1L5 589 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 LRRC31Q6UY01 552 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 TCEAL8Q8IYN2 117 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 TAB3Q8N5C8 712 aaPredicted RBP18.32■□□□□ 0.52
RAB39A-201ENST00000320578 LRRN4Q8WUT4 740 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 FATE1Q969F0 183 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 VPS37BQ9H9H4 285 aa18.32■□□□□ 0.52
RAB39A-201ENST00000320578 EXOC1LA0A1B0GW35 172 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 DRGXA6NNA5 263 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 ERI2A8K979 691 aaKnown RBP18.31■□□□□ 0.52
RAB39A-201ENST00000320578 GJB5O95377 273 aa18.31■□□□□ 0.52
RAB39A-201ENST00000320578 HMGA1P17096 107 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms