RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ABI2Q9NYB9 513 aaPredicted RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 KLHL14Q9P2G3 628 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 DNAJB4Q9UDY4 337 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 ARL2BPQ9Y2Y0 163 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 MOXD2PA6NHM9 499 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 SDR42E2A6NKP2 422 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 USP12O75317 370 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 EOMESO95936 686 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 SNRPAP09012 282 aaKnown RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 CSH1P0DML2 217 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 CSH2P0DML3 217 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 HCAR3P49019 387 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 BMPR2Q13873 1038 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 SMAD1Q15797 465 aaKnown RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 NOMO2Q5JPE7 1267 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 LGSNQ5TDP6 509 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 C4orf50Q6ZRC1 276 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.78□□□□□ -1.16
IFT88-201ENST00000319980 ZNF75CPQ92670 426 aaPredicted RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 GRAMD1AQ96CP6 724 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 CELF6Q96J87 481 aaKnown RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 ACTR5Q9H9F9 607 aaPredicted RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 SFMBT1Q9UHJ3 866 aa7.78□□□□□ -1.16
IFT88-201ENST00000319980 MRPL42Q9Y6G3 142 aaKnown RBP7.78□□□□□ -1.16
IFT88-201ENST00000319980 A0A1W2PQ45 241 aaPredicted RBP7.77□□□□□ -1.16
IFT88-201ENST00000319980 A0A1W2PQY0 241 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 ARHGEF37A1IGU5 675 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 TM9SF1O15321 606 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 NCAM2O15394 837 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 MSI1O43347 362 aaKnown RBP7.77□□□□□ -1.16
IFT88-201ENST00000319980 MLNP12872 115 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 TYMPP19971 482 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 PTPN3P26045 913 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 MGAT1P26572 445 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 LACTB2Q53H82 288 aaPredicted RBP7.77□□□□□ -1.16
IFT88-201ENST00000319980 MROH9Q5TGP6 573 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 SDHAF4Q5VUM1 108 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 BTBD8Q5XKL5 378 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 LRRC8BQ6P9F7 803 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 TRAF7Q6Q0C0 670 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 SH2D5Q6ZV89 423 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 CEP57Q86XR8 500 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 LINC01599Q8WXQ3 324 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 RMDN2Q96LZ7 410 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 FAM111AQ96PZ2 611 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 SLC13A1Q9BZW2 595 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 ABCC13Q9NSE7 274 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 TBC1D13Q9NVG8 400 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 PCDHA11Q9Y5I1 949 aa7.77□□□□□ -1.16
IFT88-201ENST00000319980 ZBTB24O43167 697 aaPredicted RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 TADA2AO75478 443 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 INHAP05111 366 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 GSTA2P09210 222 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 NEFHP12036 1026 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 MX2P20592 715 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 PAX3P23760 479 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 DSC1Q08554 894 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 DDR2Q16832 855 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 LHX8Q68G74 356 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 RGS9BPQ6ZS82 235 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 PACS2Q86VP3 889 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 COLGALT2Q8IYK4 626 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 URGCPQ8TCY9 931 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 ARNTL2Q8WYA1 636 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 OXNAD1Q96HP4 312 aaPredicted RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 ABHD8Q96I13 439 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 APOPT1Q96IL0 206 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 PGLYRP2Q96PD5 576 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 FAM193BQ96PV7 902 aaPredicted RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 BEGAINQ9BUH8 593 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 IQCGQ9H095 443 aaKnown RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 HMX1Q9NP08 348 aaPredicted RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 MOCS1Q9NZB8 636 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 IGSF9Q9P2J2 1179 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 PRKAG3Q9UGI9 489 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 ZNF180Q9UJW8 692 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 PCDHB8Q9UN66 801 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 STARD13Q9Y3M8 1113 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 FAM159BA6NKW6 160 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 COPEO14579 308 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 TNFRSF10BO14763 440 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 EDF1O60869 148 aaKnown RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 KRT38O76015 456 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 UBOX5O94941 541 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 SERPINB6P35237 376 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 GARSP41250 739 aaKnown RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 SLC18A2Q05940 514 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 PPIDQ08752 370 aaKnown RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 MGAT5Q09328 741 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 TTC31Q49AM3 519 aaPredicted RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 CES3Q6UWW8 571 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 CDHR3Q6ZTQ4 885 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 ZNF276Q8N554 614 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 FITM2Q8N6M3 262 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 DNAAF3Q8N9W5 541 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 OR52K1Q8NGK4 314 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 CASP10Q92851 521 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 TTC17Q96AE7 1141 aa7.77□□□□□ -1.17
IFT88-201ENST00000319980 SRPK1Q96SB4 655 aaKnown RBP7.77□□□□□ -1.17
IFT88-201ENST00000319980 VPS11Q9H270 941 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms