RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C2orf54Q08AI8 447 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 ANO4Q32M45 955 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 SLC13A5Q86YT5 568 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 NPWQ8N729 165 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 LRRN4CLQ8ND94 238 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 SUSD6Q92537 303 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 TSC1Q92574 1164 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 TBC1D31Q96DN5 1066 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 OSBPL2Q9H1P3 480 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 EBF3Q9H4W6 596 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 ZFP14Q9HCL3 533 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 CDC23Q9UJX2 597 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 C2CD4DB7Z1M9 353 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 MFSD11O43934 449 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 TBL1XO60907 577 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 IL9P15248 144 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 WEE1P30291 646 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 CETN2P41208 172 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 GBE1Q04446 702 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 USP4Q13107 963 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 NCBP2-AS2Q69YL0 99 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 VITQ6UXI7 678 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 HTR3DQ70Z44 454 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 ZC3H18Q86VM9 953 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 ZNF354CQ86Y25 554 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 NAT16Q8N8M0 369 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 TDRD5Q8NAT2 981 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 BPIFB1Q8TDL5 484 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 DUS2Q9NX74 493 aaKnown RBP15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 NUMBLQ9Y6R0 609 aa15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 NUP210Q8TEM1 1887 aaPredicted RBP15.87■□□□□ 0.13
PDLIM5-202ENST00000318007 NEDD8-MDP1E9PL57 170 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 KRIT1O00522 736 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 APOL1O14791 398 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 ARSAP15289 507 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 SMAD4Q13485 552 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 DPYSQ14117 519 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 DDX42Q86XP3 938 aaKnown RBP eCLIP15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 TMEM25Q86YD3 366 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 PSTKQ8IV42 348 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 CARNMT1Q8N4J0 409 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 PLD5Q8N7P1 536 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 NECTIN4Q96NY8 510 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 CARD6Q9BX69 1037 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 DCLK3Q9C098 648 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 ZYG11BQ9C0D3 744 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 DENND4AQ7Z401 1863 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 MYOFQ9NZM1 2061 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 DFFAO00273 331 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 TJP3O95049 919 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 PRLRP16471 622 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 PFKLP17858 780 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 PAFAH1B1P43034 410 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 ARTNQ5T4W7 220 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 MANEALQ5VSG8 457 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 PTCRAQ6ISU1 281 aaPredicted RBP15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 TMCO3Q6UWJ1 677 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 KLHL7Q8IXQ5 586 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 ZNF683Q8IZ20 524 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 RASGEF1CQ8N431 466 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 DEPDC1BQ8WUY9 529 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 TMA16Q96EY4 203 aaKnown RBP15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 C1orf74Q96LT6 269 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 CLEC4EQ9ULY5 219 aa15.86■□□□□ 0.13
PDLIM5-202ENST00000318007 E2F8A0AVK6 867 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 OTOL1A6NHN0 477 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 ASGR2P07307 311 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 OR1E1P30953 314 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 OTUD4Q01804 1114 aaKnown RBP15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 KLF1Q13351 362 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 LY6G5CQ5SRR4 150 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 OTOP3Q7RTS5 596 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 OR52K2Q8NGK3 314 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 WFDC5Q8TCV5 224 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 HINFPQ9BQA5 517 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 RBM12Q9NTZ6 932 aaKnown RBP15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 GTSE1Q9NYZ3 720 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 LIMD1Q9UGP4 676 aa15.85■□□□□ 0.13
PDLIM5-202ENST00000318007 KCNJ1P48048 391 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 IFNAR2P48551 515 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 COPS2P61201 443 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 SLC10A2Q12908 348 aaPredicted RBP15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 PPP2R5EQ16537 467 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 RABGAP1LQ5R372 815 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 LEKR1Q6ZMV7 388 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 FAM71BQ8TC56 605 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 ACTL9Q8TC94 416 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 ACTRT1Q8TDG2 376 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 P3H4Q92791 437 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 BBS2Q9BXC9 721 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 DDX47Q9H0S4 455 aaKnown RBP15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 ZMYM5Q9UJ78 669 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 TYW5A2RUC4 315 aaKnown RBP15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 H0Y626 953 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 DCLK1O15075 740 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 TRIM24O15164 1050 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 GDI1P31150 447 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 CHKAP35790 457 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 TERF1P54274 439 aa15.84■□□□□ 0.13
PDLIM5-202ENST00000318007 NRLP54845 237 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms