RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 C2CD6Q53TS8 623 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 CCDC183Q5T5S1 534 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 TAF3Q5VWG9 929 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 SLC23A3Q6PIS1 610 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 KIAA1324Q6UXG2 1013 aaKnown RBP20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 CHSY1Q86X52 802 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 LGI2Q8N0V4 545 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 TMEM35BQ8NCS4 154 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 SLC20A1Q8WUM9 679 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 MTG2Q9H4K7 406 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 FAM204AQ9H8W3 233 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 PRSS16Q9NQE7 514 aa20.51■□□□□ 0.87
PDZRN3-202ENST00000308537 KHNYNO15037 678 aaKnown RBP20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 MBD3O95983 291 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 NOS2P35228 1153 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 HOXD12P35452 270 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 SCNN1AP37088 669 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 CSKP41240 450 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 MATKP42679 507 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 TRIM61Q5EBN2 209 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 ZDHHC17Q8IUH5 632 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 CARNMT1Q8N4J0 409 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 ZNF557Q8N988 423 aaPredicted RBP20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 OR2T3Q8NH03 318 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 IGSF8Q969P0 613 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 SIPA1Q96FS4 1042 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 TOE1Q96GM8 510 aaKnown RBP20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 CAPN10Q9HC96 672 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 FAM207AQ9NSI2 230 aaPredicted RBP20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 PIGVQ9NUD9 493 aa20.5■□□□□ 0.87
PDZRN3-202ENST00000308537 FAM170AA1A519 330 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 C4orf47A7E2U8 309 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 LGALS16A8MUM7 142 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 GOLGA6L22H0YM25 854 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 LSM8O95777 96 aaKnown RBP20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 CYP1A1P04798 512 aaPredicted RBP20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 CD6P30203 668 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 CCR1P32246 355 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 FLT3P36888 993 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 CTSOP43234 321 aaPredicted RBP20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 POLR2FP61218 127 aaKnown RBP20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 FMO1Q01740 532 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 E2F5Q15329 346 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 C5orf22Q49AR2 442 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 FNDC3BQ53EP0 1204 aaKnown RBP20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 PITRM1Q5JRX3 1037 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 CXorf57Q6NSI4 855 aaKnown RBP20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 FBXL22Q6P050 247 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 SASS6Q6UVJ0 657 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 C14orf80Q86SX3 495 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 CIR1Q86X95 450 aaPredicted RBP20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 ZNF683Q8IZ20 524 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 APCDD1Q8J025 514 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 ATP6V0D2Q8N8Y2 350 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 OR52K2Q8NGK3 314 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 C18orf8Q96DM3 657 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 ALG14Q96F25 216 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 PGAP3Q96FM1 320 aaPredicted RBP20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 HSPA12BQ96MM6 686 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 TMEM59LQ9UK28 342 aa20.49■□□□□ 0.87
PDZRN3-202ENST00000308537 SYNJ2BP-COX16A0A087WUM0 186 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 SYNCRIPO60506 623 aaKnown RBP20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 GFPT2O94808 682 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 ATP1A3P13637 1013 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 POLR2EP19388 210 aaKnown RBP20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 GGCXP38435 758 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 CXCR3P49682 368 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 RPS14P62263 151 aaKnown RBP20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 TYRO3Q06418 890 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 CDH18Q13634 790 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 ARID5BQ14865 1188 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 SYCP1Q15431 976 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 PLEKHG6Q3KR16 790 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 PPM1JQ5JR12 505 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 CACUL1Q86Y37 369 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 CCAR2Q8N163 923 aaKnown RBP20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 ERGIC2Q96RQ1 377 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 NLRC4Q9NPP4 1024 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 FSCN3Q9NQT6 498 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 ARHGEF38Q9NXL2 777 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 COX16Q9P0S2 106 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 PLA2G4CQ9UP65 541 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 CEP83Q9Y592 693 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 HS3ST4Q9Y661 456 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 CEP295Q9C0D2 2601 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 ITIH6Q6UXX5 1313 aa20.48■□□□□ 0.87
PDZRN3-202ENST00000308537 C10orf142B7Z368 130 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 F5H5T6 163 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 M0QYT0 321 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 ZBTB24O43167 697 aaPredicted RBP20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 PAGE1O75459 146 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 ADCY5O95622 1261 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 ATP5BP06576 529 aaKnown RBP20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 SLC2A3P11169 496 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 SOX5P35711 763 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 CENPCQ03188 943 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 AUHQ13825 339 aaKnown RBP20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 HNRNPA1L2Q32P51 320 aaKnown RBP20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 ERICH1Q86X53 443 aa20.47■□□□□ 0.87
PDZRN3-202ENST00000308537 KDM1BQ8NB78 822 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms