RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 PLIN3O60664 434 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 MOCS2O96007 188 aaPredicted RBP13.77□□□□□ -0.21
SEC23A-201ENST00000307712 ZBTB48P10074 688 aaPredicted RBP13.77□□□□□ -0.21
SEC23A-201ENST00000307712 TRIM16LQ309B1 348 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 UNC5BQ8IZJ1 945 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 CRYGNQ8WXF5 182 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 CERS2Q96G23 380 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 APBA2Q99767 749 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 STN1Q9H668 368 aaKnown RBP13.77□□□□□ -0.21
SEC23A-201ENST00000307712 CYP3A43Q9HB55 503 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 SPC25Q9HBM1 224 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 SNX15Q9NRS6 342 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 TSC22D4Q9Y3Q8 395 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 DHX15O43143 795 aaKnown RBP13.77□□□□□ -0.21
SEC23A-201ENST00000307712 TRMUO75648 421 aaKnown RBP13.77□□□□□ -0.21
SEC23A-201ENST00000307712 HSPA1AP0DMV8 641 aaKnown RBP13.77□□□□□ -0.21
SEC23A-201ENST00000307712 HSPA1BP0DMV9 641 aaKnown RBP13.77□□□□□ -0.21
SEC23A-201ENST00000307712 STMN1P16949 149 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 CNTN2Q02246 1040 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 CSHL1Q14406 222 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 KCNMB4Q86W47 210 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 C12orf29Q8N999 325 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 PHF21BQ96EK2 531 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 VPS50Q96JG6 964 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 BEGAINQ9BUH8 593 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 PCDH18Q9HCL0 1135 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 KIAA1257Q9ULG3 409 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 NR2E3Q9Y5X4 410 aa13.77□□□□□ -0.21
SEC23A-201ENST00000307712 SLCO1B7G3V0H7 640 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 NFICP08651 508 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 IDH3AP50213 366 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 TMEM63BQ5T3F8 832 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 XYLT1Q86Y38 959 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 FAM156AQ8NDB6 213 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 PPHLN1Q8NEY8 458 aaKnown RBP13.76□□□□□ -0.21
SEC23A-201ENST00000307712 NCLNQ969V3 563 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 FBXL18Q96ME1 805 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 TMEM216Q9P0N5 145 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 COPG2Q9UBF2 871 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 RSL24D1Q9UHA3 163 aaKnown RBP13.76□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF180Q9UJW8 692 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 DMTF1Q9Y222 760 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 A0A0A0MRY4 1105 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 H2AFYO75367 372 aaKnown RBP13.76□□□□□ -0.21
SEC23A-201ENST00000307712 MPSTP25325 297 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 PSMA4P25789 261 aaKnown RBP13.76□□□□□ -0.21
SEC23A-201ENST00000307712 SLC18A2Q05940 514 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 FUT11Q495W5 492 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 DSELQ8IZU8 1212 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 URGCPQ8TCY9 931 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 SPATA13Q96N96 652 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 UBE2OQ9C0C9 1292 aaKnown RBP13.76□□□□□ -0.21
SEC23A-201ENST00000307712 RNF19AQ9NV58 838 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF358Q9NW07 568 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 GID8Q9NWU2 228 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 MRASO14807 208 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 CLOCKO15516 846 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 GRIN3BO60391 1043 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF23P17027 643 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 GRIA1P42261 906 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 FASTKQ14296 549 aaKnown RBP13.76□□□□□ -0.21
SEC23A-201ENST00000307712 NAPEPLDQ6IQ20 393 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 MYO1HQ8N1T3 1032 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 DLG3Q92796 817 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 BTBD9Q96Q07 612 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 NPAS2Q99743 824 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 OMDQ99983 421 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 NTPCRQ9BSD7 190 aaKnown RBP13.76□□□□□ -0.21
SEC23A-201ENST00000307712 ACE2Q9BYF1 805 aaPredicted RBP13.76□□□□□ -0.21
SEC23A-201ENST00000307712 PTTG2Q9NZH5 202 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF229Q9UJW7 825 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 SYNPO2Q9UMS6 1093 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 TJP1Q07157 1748 aa13.76□□□□□ -0.21
SEC23A-201ENST00000307712 ZNF839A8K0R7 811 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 BHMG1C9JSJ3 638 aaPredicted RBP13.75□□□□□ -0.21
SEC23A-201ENST00000307712 NR5A2O00482 541 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 ADCY6O43306 1168 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 ALBP02768 609 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
SEC23A-201ENST00000307712 GRIA4P48058 902 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 SLC6A3Q01959 620 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 NADK2Q4G0N4 442 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 EEF1DP3Q658K8 133 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 OR52E8Q6IFG1 317 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 TNIP3Q96KP6 325 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 MRIQ9BWK5 157 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 CDH19Q9H159 772 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 C1orf232A0A0U1RR37 186 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 MPOP05164 745 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 GNL1P36915 607 aaPredicted RBP13.75□□□□□ -0.21
SEC23A-201ENST00000307712 PSME3P61289 254 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 FSTL1Q12841 308 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 POU6F1Q14863 301 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 TRIM74Q86UV6 250 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 TRIM73Q86UV7 250 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 DHFR2Q86XF0 187 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 FAM136AQ96C01 138 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 RTKNQ9BST9 563 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 PIF1Q9H611 641 aa13.75□□□□□ -0.21
SEC23A-201ENST00000307712 DNAJB4Q9UDY4 337 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms