RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 AK5Q9Y6K8 562 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TCP11X1B4DZS4 312 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 KCNN4O15554 427 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 DNAJC6O75061 913 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 CCNE2O96020 404 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PIK3R1P27986 724 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TKTL1P51854 596 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 KCNC3Q14003 757 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SLC14A2Q15849 920 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SYCE2Q6PIF2 218 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 JAMLQ86YT9 394 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 FAM71AQ8IYT1 594 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SAYSD1Q9NPB0 183 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 MAGEL2Q9UJ55 1249 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PHLPP1O60346 1717 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 HTR3EA5X5Y0 456 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ARIH2O95376 493 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ASLP04424 464 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ALADP13716 330 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 POU4F1Q01851 419 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 GALNT1Q10472 559 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 PDK4Q16654 411 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 STAG3L4Q8TBR4 150 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 NFKBIZQ9BYH8 718 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 IL1RAPQ9NPH3 570 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ABCC13Q9NSE7 274 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 DLEC1Q9Y238 1755 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 PEX3P56589 373 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TWF2Q6IBS0 349 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 SLC44A2Q8IWA5 706 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 PPP1R16BQ96T49 567 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SPINK5Q9NQ38 1064 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 ARHGAP28Q9P2N2 729 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PLEKHG6Q3KR16 790 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 RUBCNLQ9H714 662 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SUGCTQ9HAC7 445 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 CYP27B1O15528 508 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SCGNO76038 276 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 AKAP5P24588 427 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PON1P27169 355 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PTGISQ16647 500 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 C14orf80Q86SX3 495 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 NELFCDQ8IXH7 590 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 STK32AQ8WU08 396 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TMCO6Q96DC7 493 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 NOL6Q9H6R4 1146 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 PNPLA3Q9NST1 481 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 WNK3Q9BYP7 1800 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SCN9AQ15858 1988 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 KLF11O14901 512 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SERPINF2P08697 491 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 AP1S2P56377 157 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ANKRD42Q8N9B4 389 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 C19orf18Q8NEA5 215 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 WDR36Q8NI36 951 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 MYO19Q96H55 970 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 NTPCRQ9BSD7 190 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 AKAP11Q9UKA4 1901 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 MYO5AQ9Y4I1 1855 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 SIGLEC16A6NMB1 481 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 UBXN2AP68543 259 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SLC34A1Q06495 639 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 RAB11FIP5Q9BXF6 653 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ING3Q9NXR8 418 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PCDHB12Q9Y5F1 795 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 C5orf60A6NFR6 353 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ZNF7P17097 686 aaPredicted RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 KCNA3P22001 575 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 DGKAP23743 735 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 GALCP54803 685 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 LRRC36Q1X8D7 754 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 GALNT13Q8IUC8 556 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 REEP2Q9BRK0 252 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 NOL11Q9H8H0 719 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 RNPEPL1Q9HAU8 725 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PADI4Q9UM07 663 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TTLL3Q9Y4R7 772 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 IRAK2O43187 625 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 IGKV5-2P06315 115 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 HPCAL1P37235 193 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TNK2Q07912 1038 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TDRD10Q5VZ19 366 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 GSPT2Q8IYD1 628 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 GALNT6Q8NCL4 622 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 COQ7Q99807 217 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ROGDIQ9GZN7 287 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SNX6Q9UNH7 406 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 NCANO14594 1321 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 MAGEA4P43358 317 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 LSM12Q3MHD2 195 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 GNASQ5JWF2 1037 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 SHC4Q6S5L8 630 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 PLPPR4Q7Z2D5 763 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 CHSY1Q86X52 802 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 ZC3H7AQ8IWR0 971 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 PRMT1Q99873 361 aaKnown RBP4.1□□□□□ -1.75
USH2A-201ENST00000307340 ANKZF1Q9H8Y5 726 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 GDF3Q9NR23 364 aa4.1□□□□□ -1.75
USH2A-201ENST00000307340 TMCC3Q9ULS5 477 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms