RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 TK2O00142 265 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 GLRA3O75311 464 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 CLPTM1O96005 669 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 MOCS2O96007 188 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 FOLH1Q04609 750 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 LIN52Q52LA3 116 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 FAM219BQ5XKK7 198 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 DEFB106AQ8N104 65 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 PLD6Q8N2A8 252 aaKnown RBP13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 SLC2A14Q8TDB8 520 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 RCN3Q96D15 328 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 OR52B2Q96RD2 323 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 USP29Q9HBJ7 922 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 TCF7L2Q9NQB0 619 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 BARX2Q9UMQ3 279 aaPredicted RBP13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 POMPQ9Y244 141 aa13.65□□□□□ -0.22
TNFRSF21-201ENST00000296861 SERPINE1P05121 402 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 POLBP06746 335 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 POU6F1Q14863 301 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 TMEM259Q4ZIN3 620 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 RBM44Q6ZP01 1051 aaKnown RBP13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 CHSY1Q86X52 802 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 APLFQ8IW19 511 aaPredicted RBP13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 ARHGAP18Q8N392 663 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 TBCBQ99426 244 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 APBA2Q99767 749 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 C2orf40Q9H1Z8 148 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 NUDT5Q9UKK9 219 aa13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 MAFBQ9Y5Q3 323 aaPredicted RBP13.65□□□□□ -0.23
TNFRSF21-201ENST00000296861 ANKRD31Q8N7Z5 1873 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 DFFAO00273 331 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 MAFO75444 373 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 STAMBPO95630 424 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 SLC18A2Q05940 514 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 SLC12A1Q13621 1099 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 FSCBQ5H9T9 825 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 ZNF831Q5JPB2 1677 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 MTHFD1LQ6UB35 978 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 MARK2Q7KZI7 788 aaKnown RBP13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 IPMKQ8NFU5 416 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 OPTNQ96CV9 577 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 NPAS2Q99743 824 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 CXCL16Q9H2A7 254 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 PIF1Q9H611 641 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 PLA2G6O60733 806 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 CILPO75339 1184 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 PIGNO95427 931 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 JCHAINP01591 159 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 IQCF3P0C7M6 154 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 ZNF132P52740 706 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 ADIGQ0VDE8 80 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 KRT72Q14CN4 511 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 AMIGO2Q86SJ2 522 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 BHLHE22Q8NFJ8 381 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 MZB1Q8WU39 189 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 PHF21BQ96EK2 531 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 SNX13Q9Y5W8 968 aa13.64□□□□□ -0.23
TNFRSF21-201ENST00000296861 MFSD11O43934 449 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 LTFP02788 710 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 COX4I1P13073 169 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 HNRNPLP14866 589 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■■■■□ 19.8
TNFRSF21-201ENST00000296861 ARF4P18085 180 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 IDH3AP50213 366 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 SERPINB9P50453 376 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 ABCE1P61221 599 aaKnown RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 METTL7BQ6UX53 244 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 ZNF276Q8N554 614 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 DCUN1D5Q9BTE7 237 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 MRPL1Q9BYD6 325 aaKnown RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 LIN28AQ9H9Z2 209 aaKnown RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 SNX15Q9NRS6 342 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 FAF1Q9UNN5 650 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 RUVBL2Q9Y230 463 aaKnown RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 ZNF711Q9Y462 761 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 ASB3Q9Y575 518 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 PRRC2BQ5JSZ5 2229 aaKnown RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 TMEM233B4DJY2 109 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 PLIN3O60664 434 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 PMPCBO75439 489 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 ARSAP15289 507 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 ALDH1A3P47895 512 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 PLIN5Q00G26 463 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 GK3PQ14409 553 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 DBN1Q16643 649 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 ERLEC1Q96DZ1 483 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 P2RY11Q96G91 374 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 OLFM3Q96PB7 478 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 UBE2OQ9C0C9 1292 aaKnown RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 SUDS3Q9H7L9 328 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 A0A088AWK7 358 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 C15orf38-AP3S2A0A0A6YYH1 394 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 ALDOAP04075 364 aaKnown RBP13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 LMO2P25791 158 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 NDUFV1P49821 464 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 SLC6A3Q01959 620 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 RALGDSQ12967 914 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 CTBP1Q13363 440 aa13.63□□□□□ -0.23
TNFRSF21-201ENST00000296861 SLC5A9Q2M3M2 681 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms