RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ENDOD1O94919 500 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 MT-CYBP00156 380 aaPredicted RBP9.55□□□□□ -0.88
PRDM9-201ENST00000296682 KRT16P08779 473 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 ESRRAP11474 423 aaPredicted RBP9.55□□□□□ -0.88
PRDM9-201ENST00000296682 RPL34P49207 117 aaKnown RBP9.55□□□□□ -0.88
PRDM9-201ENST00000296682 NCBP2-AS2Q69YL0 99 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 RIBC1Q8N443 379 aaPredicted RBP9.55□□□□□ -0.88
PRDM9-201ENST00000296682 TMEM30AQ9NV96 361 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 SLC45A1Q9Y2W3 748 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 TRIP11Q15643 1979 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 CCL22O00626 93 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 NEMP1O14524 444 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 NFKB1P19838 968 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 AXLP30530 894 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 ARL1P40616 181 aaPredicted RBP9.55□□□□□ -0.88
PRDM9-201ENST00000296682 LHX1P48742 406 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 GPR15P49685 360 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 YWHAHQ04917 246 aaPredicted RBP9.55□□□□□ -0.88
PRDM9-201ENST00000296682 DLG2Q15700 870 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 SAPCD2Q86UD0 394 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 RASAL3Q86YV0 1011 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 ZNF567Q8N184 647 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 CRYBG2Q8N1P7 616 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 TRPV1Q8NER1 839 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 E2F7Q96AV8 911 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 TSNARE1Q96NA8 513 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 COLEC11Q9BWP8 271 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 FSD1LQ9BXM9 530 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 CYP4F11Q9HBI6 524 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 IARS2Q9NSE4 1012 aaKnown RBP9.55□□□□□ -0.88
PRDM9-201ENST00000296682 A0A0A0MRY4 1105 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 ZWINTO95229 277 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 ODC1P11926 461 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 ITIH4Q14624 930 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 ZBTB6Q15916 424 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 DEFB128Q7Z7B8 93 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 STRA8Q7Z7C7 330 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 TTC7BQ86TV6 843 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 LONP2Q86WA8 852 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 CCNYL1Q8N7R7 359 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 OR6P1Q8NGX9 317 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 GSDMBQ8TAX9 411 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 GIPC2Q8TF65 315 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 PDCD6IPQ8WUM4 868 aaKnown RBP9.55□□□□□ -0.88
PRDM9-201ENST00000296682 DCAKDQ8WVC6 231 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 SPATA13Q96N96 652 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 AGAP2Q99490 1192 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 KDM4CQ9H3R0 1056 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 CHRAC1Q9NRG0 131 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 LRFN2Q9ULH4 789 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 PSAT1Q9Y617 370 aa9.55□□□□□ -0.88
PRDM9-201ENST00000296682 ZNF487B1APH4 448 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 TRDMT1O14717 391 aaKnown RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 CHADO15335 359 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 GYG2O15488 501 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 MGEA5O60502 916 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 DUSP11O75319 330 aaKnown RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 LRIG2O94898 1065 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 HAUS5O94927 633 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 ATXN3P54252 364 aaPredicted RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 CYP4V2Q6ZWL3 525 aaPredicted RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 LIMS2Q7Z4I7 341 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 ZNF280BQ86YH2 543 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 MCUQ8NE86 351 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 HNRNPABQ99729 332 aaKnown RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 EBNA1BP2Q99848 306 aaKnown RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 TMEM120AQ9BXJ8 343 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 NOD2Q9HC29 1040 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 TMLHEQ9NVH6 421 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 PHGDHO43175 533 aaKnown RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 BNIP3LO60238 219 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 BAG2O95816 211 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 PIRTP0C851 137 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 NQO1P15559 274 aaKnown RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 AQP5P55064 265 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 HTRA3P83110 453 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 ITGA7Q13683 1181 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 PDK4Q16654 411 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 N4BP2L1Q5TBK1 243 aaPredicted RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 FAM171A1Q5VUB5 890 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 ADGRD1Q6QNK2 874 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 ARHGAP36Q6ZRI8 547 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 RGS9BPQ6ZS82 235 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 PAQR9Q6ZVX9 377 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 CRLF3Q8IUI8 442 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 KLHL5Q96PQ7 755 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 NCAPGQ9BPX3 1015 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 TEX264Q9Y6I9 313 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 TPP1O14773 563 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 AMHP03971 560 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 POLBP06746 335 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 CTGFP29279 349 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 TUBP50607 506 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 FKBP1BP68106 108 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 ELF3P78545 371 aaPredicted RBP9.54□□□□□ -0.88
PRDM9-201ENST00000296682 BST1Q10588 318 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 STX3Q13277 289 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 KCNJ11Q14654 390 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 MORN1Q5T089 497 aa9.54□□□□□ -0.88
PRDM9-201ENST00000296682 ICE2Q659A1 982 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms