RNA–Protein interactions for RNA: ENST00000275575.11

PHTF2-202, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-202ENST00000275575 SPTLC2O15270 562 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TRAPPC3O43617 180 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CNTN5O94779 1100 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 PDIA4P13667 645 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CLDN6P56747 220 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CLN3Q13286 438 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 HLTFQ14527 1009 aaKnown RBP eCLIP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 DUOXA2Q1HG44 320 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 COQ10AQ96MF6 247 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 MCCC1Q96RQ3 725 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 HERPUD2Q9BSE4 406 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 SLC12A9Q9BXP2 914 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 PLAC1Q9HBJ0 212 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 KIAA1586Q9HCI6 787 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 SAMSN1Q9NSI8 373 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 LMBRD1Q9NUN5 540 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 ENTPD2Q9Y5L3 495 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 RAD54BQ9Y620 910 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TENM1Q9UKZ4 2725 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 MAST4O15021 2626 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CR1P17927 2039 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 C2CD4BA6NLJ0 364 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 C4orf47A7E2U8 309 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 AXIN1O15169 862 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 P4HA2O15460 535 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 HYAL3O43820 417 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 FTH1P19P0C7X4 201 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 POU3F2P20265 443 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 MCM4P33991 863 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 SLC25A11Q02978 314 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 IQCB1Q15051 598 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 KIF19Q2TAC6 998 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 SKOR2Q2VWA4 1001 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 SLC26A9Q7LBE3 791 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TECPR1Q7Z6L1 1165 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 DHX40Q8IX18 779 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 HCAR2Q8TDS4 363 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 SECISBP2LQ93073 1101 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 MMS19Q96T76 1030 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 ANKFY1Q9P2R3 1169 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 HBS1LQ9Y450 684 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 RIF1Q5UIP0 2472 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 BHMG1C9JSJ3 638 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 H0YCG3 227 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 ADAM10O14672 748 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CLIC2O15247 247 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 ALOX15BO15296 676 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 EML2O95834 649 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TRIM49P0CI25 452 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TRIM49CP0CI26 452 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 SRCP12931 536 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TEAD1P28347 426 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 NTSR1P30989 418 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 HNRNPH3P31942 346 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 GNL1P36915 607 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 EIF4A3P38919 411 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 FMO5P49326 533 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CDR1P51861 262 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 NOMO3P69849 1222 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CUL2Q13617 745 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 NFE2Q16621 373 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CCDC14Q49A88 953 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 KRT79Q5XKE5 535 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CEP135Q66GS9 1140 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 GJB7Q6PEY0 223 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TRIM65Q6PJ69 517 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 MICALCLQ6ZW33 695 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 ACOT1Q86TX2 421 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TMEM139Q8IV31 216 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 RLN3Q8WXF3 142 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 ISG20Q96AZ6 181 aaKnown RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 TRIM6Q9C030 488 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 NRSN2Q9GZP1 204 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 POLMQ9NP87 494 aaPredicted RBP3.47□□□□□ -1.85
PHTF2-202ENST00000275575 SLC39A2Q9NP94 309 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 CNGB3Q9NQW8 809 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 FBN3Q75N90 2809 aa3.47□□□□□ -1.85
PHTF2-202ENST00000275575 RYR2Q92736 4967 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 KLF8O95600 359 aaPredicted RBP3.46□□□□□ -1.86
PHTF2-202ENST00000275575 GP1BAP07359 652 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 SRPRAP08240 638 aaKnown RBP3.46□□□□□ -1.86
PHTF2-202ENST00000275575 ABL2P42684 1182 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 AP3M2P53677 418 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 EPHB3P54753 998 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 ASIC1P78348 528 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 SIM2Q14190 667 aaPredicted RBP3.46□□□□□ -1.86
PHTF2-202ENST00000275575 SGSM1Q2NKQ1 1148 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 HLA-BQ31612 363 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 ADGRF1Q5T601 910 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 WDR59Q6PJI9 974 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 NOP9Q86U38 636 aaKnown RBP3.46□□□□□ -1.86
PHTF2-202ENST00000275575 CPNE8Q86YQ8 564 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 EPS8L1Q8TE68 723 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 MAML1Q92585 1016 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 ZNF512Q96ME7 567 aaPredicted RBP3.46□□□□□ -1.86
PHTF2-202ENST00000275575 FEM1AQ9BSK4 669 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 RETREG1Q9H6L5 497 aa3.46□□□□□ -1.86
PHTF2-202ENST00000275575 DMAP1Q9NPF5 467 aaPredicted RBP3.46□□□□□ -1.86
PHTF2-202ENST00000275575 RAB20Q9NX57 234 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms