RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 OLIG2Q13516 323 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 FAM72AQ5TYM5 149 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 ATG16L1Q676U5 607 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 FAM72DQ6L9T8 149 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 RFX8Q6ZV50 586 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 BNIPLQ7Z465 357 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 TTC7BQ86TV6 843 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 ALYREFQ86V81 257 aaKnown RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 FAM72BQ86X60 149 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 HACE1Q8IYU2 909 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 STKLD1Q8NE28 680 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 GIMAP7Q8NHV1 300 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 DPF3Q92784 378 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 NT5C3BQ969T7 300 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 SENP8Q96LD8 212 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 MIPEPQ99797 713 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 SYT15Q9BQS2 421 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 TACO1Q9BSH4 297 aaKnown RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 EBF2Q9HAK2 575 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 XPNPEP3Q9NQH7 507 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 EIF2B3Q9NR50 452 aaKnown RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 MOCS1Q9NZB8 636 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 IL1RAPL1Q9NZN1 696 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 C15orf41Q9Y2V0 281 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 SHROOM3Q8TF72 1996 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 RPSAP08865 295 aaKnown RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 KITP10721 976 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 PGAM1P18669 254 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 AFF1P51825 1210 aaKnown RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 CRYMQ14894 314 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 PAFAH1B3Q15102 231 aaKnown RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 TEX44Q53QW1 395 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 C16orf46Q6P387 395 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 CES3Q6UWW8 571 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 PACS1Q6VY07 963 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 FAM35AQ86V20 835 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 RASSF3Q86WH2 238 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 KCNV2Q8TDN2 545 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 LPPQ93052 612 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 PTCD3Q96EY7 689 aaKnown RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 PGLYRP2Q96PD5 576 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 FERMT1Q9BQL6 677 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 KATNAL1Q9BW62 490 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 TSPYL2Q9H2G4 693 aaPredicted RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 ANLNQ9NQW6 1124 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 SIRPGQ9P1W8 387 aa13.25□□□□□ -0.29
CPSF6-201ENST00000266679 MARCOQ9UEW3 520 aaPredicted RBP13.25□□□□□ -0.29
CPSF6-201ENST00000266679 SF3B1O75533 1304 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■■■■■ 28.3
CPSF6-201ENST00000266679 YJEFN3A6XGL0 299 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 E7ENQ6 273 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 KCNK1O00180 336 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 FCHO1O14526 889 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 TRAFD1O14545 582 aaPredicted RBP13.24□□□□□ -0.29
CPSF6-201ENST00000266679 GABRDO14764 452 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 DCLK1O15075 740 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 DIAPH2O60879 1101 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 DNAJC6O75061 913 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 AMHP03971 560 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 FYNP06241 537 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 BPGMP07738 259 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 CRHR1P34998 444 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 CACNA2D1P54289 1103 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 DAOAP59103 153 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 FSCN1Q16658 493 aaKnown RBP13.24□□□□□ -0.29
CPSF6-201ENST00000266679 ZCCHC23Q6ZST2 131 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 ARID3BQ8IVW6 561 aaPredicted RBP13.24□□□□□ -0.29
CPSF6-201ENST00000266679 NSMCE1Q8WV22 266 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 SOCS4Q8WXH5 440 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 NSL1Q96IY1 281 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 GAD1Q99259 594 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 SMOQ99835 787 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 ARMCX1Q9P291 453 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 KLHL8Q9P2G9 620 aaPredicted RBP13.24□□□□□ -0.29
CPSF6-201ENST00000266679 NKX1-2Q9UD57 310 aaPredicted RBP13.24□□□□□ -0.29
CPSF6-201ENST00000266679 SNX10Q9Y5X0 201 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 CDY2AQ9Y6F7 541 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 MYBPHLA2RUH7 354 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 MYADML2A6NDP7 307 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 TPP1O14773 563 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 PEX11AO75192 247 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 SLC34A2O95436 690 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 CTSHP09668 335 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 USP17L7P0C7H9 530 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 CNTFP26441 200 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 CCND3P30281 292 aaPredicted RBP13.24□□□□□ -0.29
CPSF6-201ENST00000266679 TPI1P60174 286 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 DSTYKQ6XUX3 929 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 TIFABQ6ZNK6 161 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 PID1Q7Z2X4 250 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 TTC8Q8TAM2 541 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 ARNTL2Q8WYA1 636 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 CDKL2Q92772 493 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 PAWRQ96IZ0 340 aaKnown RBP13.24□□□□□ -0.29
CPSF6-201ENST00000266679 C7orf26Q96N11 449 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 AGAP3Q96P47 875 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 KCNK16Q96T55 309 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 PRDM16Q9HAZ2 1276 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 TMEM30AQ9NV96 361 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 PSAT1Q9Y617 370 aa13.24□□□□□ -0.29
CPSF6-201ENST00000266679 I6L893 689 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms