RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 OLFM3Q96PB7 478 aa23.37■■□□□ 1.33
UFD1-201ENST00000263202 AGO1Q9UL18 857 aaKnown RBP23.37■■□□□ 1.33
UFD1-201ENST00000263202 RAB21Q9UL25 225 aa23.37■■□□□ 1.33
UFD1-201ENST00000263202 NUP205Q92621 2012 aa23.37■■□□□ 1.33
UFD1-201ENST00000263202 GREM1O60565 184 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 GAS8O95995 478 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 SLC6A4P31645 630 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 VSNL1P62760 191 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 XRCC4Q13426 336 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 TMEM184AQ6ZMB5 413 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 SYDE1Q6ZW31 735 aaPredicted RBP23.36■■□□□ 1.33
UFD1-201ENST00000263202 B4GALNT4Q76KP1 1039 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 BZW1Q7L1Q6 419 aaKnown RBP23.36■■□□□ 1.33
UFD1-201ENST00000263202 IGSF8Q969P0 613 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 ERP44Q9BS26 406 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 RAB17Q9H0T7 212 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 TASP1Q9H6P5 420 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 GDF3Q9NR23 364 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 MPP6Q9NZW5 540 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 UTP11Q9Y3A2 253 aaKnown RBP23.36■■□□□ 1.33
UFD1-201ENST00000263202 A0A1W2PPC1 479 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 DRGXA6NNA5 263 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 SOBPA7XYQ1 873 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 H7C0C1 242 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 ZNF197O14709 1029 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 ATP5OP48047 213 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 IRAK1P51617 712 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 PPP1R7Q15435 360 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 DARS2Q6PI48 645 aaKnown RBP23.36■■□□□ 1.33
UFD1-201ENST00000263202 GSTA5Q7RTV2 222 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 CCDC33Q8N5R6 958 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 NETO2Q8NC67 525 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 MYEOVQ96EZ4 313 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 ZYG11BQ9C0D3 744 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 KLC2Q9H0B6 622 aa23.36■■□□□ 1.33
UFD1-201ENST00000263202 ESYT3A0FGR9 886 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 WASH4PA8MWX3 477 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 DYNC1I1O14576 645 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 LINC01565O15544 149 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 LATS1O95835 1130 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 SERPINB6P35237 376 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 PTK6Q13882 451 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 DUPD1Q68J44 220 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 NLRP14Q86W24 1093 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 TP53INP2Q8IXH6 220 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 CMTM8Q8IZV2 173 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 EFHBQ8N7U6 833 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 SEC14L1Q92503 715 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 STOML2Q9UJZ1 356 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 RAD54BQ9Y620 910 aa23.35■■□□□ 1.33
UFD1-201ENST00000263202 BCLAF3A2AJT9 711 aaKnown RBP23.34■■□□□ 1.33
UFD1-201ENST00000263202 F5H5T6 163 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 SGK1O00141 431 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 TUBBP07437 444 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 TRADDQ15628 312 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 C5orf22Q49AR2 442 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 ADGRF1Q5T601 910 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 Q6ZNB5 142 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 IFT20Q8IY31 132 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 LGI2Q8N0V4 545 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 RTL3Q8N8U3 475 aaKnown RBP23.34■■□□□ 1.33
UFD1-201ENST00000263202 CASKIN2Q8WXE0 1202 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 RPRD1AQ96P16 312 aaPredicted RBP23.34■■□□□ 1.33
UFD1-201ENST00000263202 PRDM12Q9H4Q4 367 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 LMCD1Q9NZU5 365 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 ARHGAP26Q9UNA1 814 aa23.34■■□□□ 1.33
UFD1-201ENST00000263202 NUP210Q8TEM1 1887 aaPredicted RBP23.34■■□□□ 1.33
UFD1-201ENST00000263202 CNTN5O94779 1100 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 RHOQP17081 205 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 GDF10P55107 478 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 MLLT1Q03111 559 aaPredicted RBP23.33■■□□□ 1.33
UFD1-201ENST00000263202 ALFQ53S48 1182 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 RARS2Q5T160 578 aaKnown RBP23.33■■□□□ 1.33
UFD1-201ENST00000263202 RFWD3Q6PCD5 774 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 PRUNE1Q86TP1 453 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 GLIS1Q8NBF1 620 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 LRRN4Q8WUT4 740 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 QKIQ96PU8 341 aaKnown RBP eCLIP23.33■■□□□ 1.33
UFD1-201ENST00000263202 TRIM31Q9BZY9 425 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 SMG9Q9H0W8 520 aaKnown RBP23.33■■□□□ 1.33
UFD1-201ENST00000263202 USP29Q9HBJ7 922 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 NDFIP2Q9NV92 336 aa23.33■■□□□ 1.33
UFD1-201ENST00000263202 KRT14P02533 472 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 CEBPBP17676 345 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 MCM3P25205 808 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 AVPR1AP37288 418 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 TRIP13Q15645 432 aaPredicted RBP23.33■■□□□ 1.32
UFD1-201ENST00000263202 SLC45A4Q5BKX6 768 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 CDKL3Q8IVW4 592 aaPredicted RBP23.33■■□□□ 1.32
UFD1-201ENST00000263202 ITFG1Q8TB96 612 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 RSAD2Q8WXG1 361 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 DPH5Q9H2P9 285 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 TTYH1Q9H313 450 aaPredicted RBP23.33■■□□□ 1.32
UFD1-201ENST00000263202 TMEM248Q9NWD8 314 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 CFAP97Q9P2B7 532 aa23.33■■□□□ 1.32
UFD1-201ENST00000263202 COLQQ9Y215 455 aaPredicted RBP23.33■■□□□ 1.32
UFD1-201ENST00000263202 MRPS23Q9Y3D9 190 aaKnown RBP23.33■■□□□ 1.32
UFD1-201ENST00000263202 NYNRINQ9P2P1 1898 aaKnown RBP23.33■■□□□ 1.32
UFD1-201ENST00000263202 SHROOM3Q8TF72 1996 aa23.32■■□□□ 1.32
UFD1-201ENST00000263202 HACD1B0YJ81 288 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms