RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FAM126BQ8IXS8 530 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 KRT78Q8N1N4 520 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 TSPAN14Q8NG11 270 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 FRMD8P1Q9BZ68 369 aaPredicted RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 EPB41L1Q9H4G0 881 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 IL17RBQ9NRM6 502 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 SNTG2Q9NY99 539 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 SHOC2Q9UQ13 582 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 ARIH1Q9Y4X5 557 aaPredicted RBP12.31□□□□□ -0.44
SMG6-201ENST00000263073 CNTNAP2Q9UHC6 1331 aa12.31□□□□□ -0.44
SMG6-201ENST00000263073 SLC26A4O43511 780 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 AVILO75366 819 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 MED26O95402 600 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 FCGR1AP12314 374 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 PGAM1P18669 254 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 TALDO1P37837 337 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 CD151P48509 253 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 CCDC153Q494R4 210 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 DNAJB14Q8TBM8 379 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 HTR3CQ8WXA8 447 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 TSEN34Q9BSV6 310 aaKnown RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 A0A1W2PPM1 405 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 SYNCRIPO60506 623 aaKnown RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 CCR1P32246 355 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 GRK3P35626 688 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 SREBF1P36956 1147 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 ARL4DP49703 201 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 MAGEB10Q96LZ2 347 aaPredicted RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 TOR4AQ9NXH8 423 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 COG5Q9UP83 839 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 A0A087WZ62 844 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 KANSL1LA0AUZ9 987 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 ANKRD63C9JTQ0 380 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 SLCO1B7G3V0H7 640 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 MAGEB2O15479 319 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 CCT3P49368 545 aaKnown RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 SNX17Q15036 470 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 ZNF284Q2VY69 593 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 FAM45BPQ6NSW5 357 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 WDR59Q6PJI9 974 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 CACTIN-AS1Q8N1I8 211 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 ZCCHC9Q8N567 271 aaKnown RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 TRAPPC12Q8WVT3 735 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 FBXO32Q969P5 355 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 PGM2Q96G03 612 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 CLPTM1LQ96KA5 538 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 FDXACB1Q9BRP7 624 aaPredicted RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 NMRAL1Q9HBL8 299 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 DIABLOQ9NR28 239 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 SLC38A7Q9NVC3 462 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 ATAD3AQ9NVI7 634 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 A0A0B4J269 797 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 ICAM1P05362 532 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 GP5P40197 560 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 MCL1Q07820 350 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 CCNIQ14094 377 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 DCP1BQ8IZD4 617 aaKnown RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 FBXO39Q8N4B4 442 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 MBOAT7Q96N66 472 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 C12orf65Q9H3J6 166 aaKnown RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 EPS8L2Q9H6S3 715 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 A1CFQ9NQ94 594 aaKnown RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 PDGFCQ9NRA1 345 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 KDM6AO15550 1401 aaPredicted RBP12.3□□□□□ -0.44
SMG6-201ENST00000263073 SLC12A8A0AV02 714 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 MIPP30301 263 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 RGS2P41220 211 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 FOLH1Q04609 750 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 GRIK3Q13003 919 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 TTLL9Q3SXZ7 439 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 NT5DC1Q5TFE4 455 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 CCNJLQ8IV13 435 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 TNS4Q8IZW8 715 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 ZNF276Q8N554 614 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 SLC35C1Q96A29 364 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 FAM84AQ96KN4 292 aa12.3□□□□□ -0.44
SMG6-201ENST00000263073 DBTP11182 482 aaKnown RBP12.29□□□□□ -0.44
SMG6-201ENST00000263073 ODC1P11926 461 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 DARSP14868 501 aaKnown RBP12.29□□□□□ -0.44
SMG6-201ENST00000263073 NAMPTP43490 491 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 OXCT1P55809 520 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 C1DQ13901 141 aaKnown RBP12.29□□□□□ -0.44
SMG6-201ENST00000263073 LY6KQ17RY6 165 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 ARMC3Q5W041 872 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 EXOC3L1Q86VI1 746 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
SMG6-201ENST00000263073 FAM50BQ9Y247 325 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 BTN3A1O00481 513 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 RAD51BO15315 384 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 KCNT2Q6UVM3 1135 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 HHIPL2Q6UWX4 724 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 ZNF621Q6ZSS3 439 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 IZUMO1Q8IYV9 350 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 LNX1Q8TBB1 728 aaPredicted RBP12.29□□□□□ -0.44
SMG6-201ENST00000263073 PPP1R2P1Q96PQ5 205 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 NDNQ99608 321 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 ALG9Q9H6U8 611 aa12.29□□□□□ -0.44
SMG6-201ENST00000263073 DOLKQ9UPQ8 538 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms