RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 HEY1Q9Y5J3 304 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 CCDC85CA6NKD9 419 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 YWHAQP27348 245 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 HOXA11P31270 313 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 SLC8A1P32418 973 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 FLT3P36888 993 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 RPL7AP62424 266 aaKnown RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 AP1B1Q10567 949 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 FRG1Q14331 258 aaKnown RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 TTC39BQ5VTQ0 682 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 DENND5BQ6ZUT9 1274 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 RASSF3Q86WH2 238 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 CENPIQ92674 756 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 FAR2Q96K12 515 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 SDCBP2Q9H190 292 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 NINJ2Q9NZG7 142 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 GRHL1Q9NZI5 618 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 KIF17Q9P2E2 1029 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 LATS1O95835 1130 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 NCAM1P13591 858 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 IGFBP4P22692 258 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 PHKG1Q16816 387 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 TRIM68Q6AZZ1 485 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 OLFML1Q6UWY5 402 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 OOSP2Q86WS3 158 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ECHDC2Q86YB7 292 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 NPAS4Q8IUM7 802 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 SUGP1Q8IWZ8 645 aaKnown RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 CPB2Q96IY4 423 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 FZD1Q9UP38 647 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 E7ESA3 106 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 KCNN4O15554 427 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 COL6A2P12110 1019 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 PGAM1P18669 254 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 IKBKEQ14164 716 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 VARS2Q5ST30 1063 aaKnown RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 CCDC149Q6ZUS6 474 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 LRRC8DQ7L1W4 858 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 LIMS2Q7Z4I7 341 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 UBA3Q8TBC4 463 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 HDAC7Q8WUI4 952 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 HAPLN3Q96S86 360 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 CCT8L2Q96SF2 557 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 TRIM54Q9BYV2 358 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 PITPNM3Q9BZ71 974 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 MRPL40Q9NQ50 206 aaKnown RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 STX18Q9P2W9 335 aaKnown RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ZNF510Q9Y2H8 683 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 TCRBV5S1A1TA0A578 114 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 URODP06132 367 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 PDGFRBP09619 1106 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 AKT1P31749 480 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ALDH1A3P47895 512 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 KCTD16Q68DU8 428 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 RHBDF2Q6PJF5 856 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 KYAT3Q6YP21 454 aaKnown RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 FAM183BPQ6ZVS7 135 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ZNF276Q8N554 614 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 SLC7A14Q8TBB6 771 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 SLC2A13Q96QE2 648 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 TRIM15Q9C019 465 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 SEMA4AQ9H3S1 761 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 ANLNQ9NQW6 1124 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 NFKBIL1Q9UBC1 381 aaPredicted RBP8.44□□□□□ -1.06
PTPN3-201ENST00000262539 PHF24Q9UPV7 400 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 BACE2Q9Y5Z0 518 aa8.44□□□□□ -1.06
PTPN3-201ENST00000262539 BHMG1C9JSJ3 638 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 M0QZQ0 153 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ADAMTS4O75173 837 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 OAZ2O95190 189 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 CXCR3P49682 368 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 HNRNPDQ14103 355 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 IRAK1BP1Q5VVH5 260 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 WSCD1Q658N2 575 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 PKN3Q6P5Z2 889 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 C9orf72Q96LT7 481 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 GBP5Q96PP8 586 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 EPC1Q9H2F5 836 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 CAPN10Q9HC96 672 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 SCUBE2Q9NQ36 999 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 XPO7Q9UIA9 1087 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 CFLARO15519 480 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ZSCAN9O15535 394 aaPredicted RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 RHOQP17081 205 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 RPL22P35268 128 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 OR1G1P47890 313 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 TAS2R40P59535 323 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 SEMA5AQ13591 1074 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 BTN2A2Q8WVV5 523 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ZFP42Q96MM3 310 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 IL22Q9GZX6 179 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 ATP11BQ9Y2G3 1177 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 EEF1B2P24534 225 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 CDH8P55286 799 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 GPR17Q13304 367 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 AUHQ13825 339 aaKnown RBP8.43□□□□□ -1.06
PTPN3-201ENST00000262539 MGAT5BQ3V5L5 792 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 MDH1BQ5I0G3 518 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 SPANXN3Q5MJ09 141 aa8.43□□□□□ -1.06
PTPN3-201ENST00000262539 PDPK2PQ6A1A2 396 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms