RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 DUSP4Q13115 394 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 DEFB128Q7Z7B8 93 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 EXOC3L1Q86VI1 746 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF547Q8IVP9 402 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 CEP97Q8IW35 865 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF567Q8N184 647 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 LKAAEAR1Q8TD35 194 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 MAK16Q9BXY0 300 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 CARD9Q9H257 536 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 RMND1Q9NWS8 449 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 LHX3Q9UBR4 397 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 EXO1Q9UQ84 846 aaKnown RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 SERPINC1P01008 464 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 CTSBP07858 339 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 GRB7Q14451 532 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 KCNT2Q6UVM3 1135 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 PAXIP1Q6ZW49 1069 aaPredicted RBP5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 ADGRG2Q8IZP9 1017 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 LMNTD1Q8N9Z9 388 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 COLEC11Q9BWP8 271 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 SEC16AO15027 2179 aa5.85□□□□□ -1.47
TOPBP1-201ENST00000260810 C4orf51C9J302 202 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 FOXS1O43638 330 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 EOMESO95936 686 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 PPARDQ03181 441 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 TXNDC8Q6A555 127 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 NOTUMQ6P988 496 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 BBS12Q6ZW61 710 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 RNF10Q8N5U6 811 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 ACTL9Q8TC94 416 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 ECHDC3Q96DC8 303 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 GMIPQ9P107 970 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 ATP8A1Q9Y2Q0 1164 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 RECKO95980 971 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 DRD3P35462 400 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 HSD17B3P37058 310 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 RPS24P62847 133 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC10A7Q0GE19 358 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 PEX6Q13608 980 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 GBX1Q14549 363 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 FBXL22Q6P050 247 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 RPS27LQ71UM5 84 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 PDCD7Q8N8D1 485 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 SORT1Q99523 831 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 HEMGNQ9BXL5 484 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC39A8Q9C0K1 460 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 GTSE1Q9NYZ3 720 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 AGO1Q9UL18 857 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 MTCH2Q9Y6C9 303 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 NINQ8N4C6 2090 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 TMEM202A6NGA9 273 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 WASH4PA8MWX3 477 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 CBX2Q14781 532 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC25A52Q3SY17 297 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 TEX44Q53QW1 395 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 KIAA1211LQ6NV74 962 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 FUT10Q6P4F1 479 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 PHYKPLQ8IUZ5 450 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 LILRA3Q8N6C8 439 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF564Q8TBZ8 553 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 SORCS1Q8WY21 1168 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 CAVIN3Q969G5 261 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 CCDC51Q96ER9 411 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 VCPIP1Q96JH7 1222 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 RNF157Q96PX1 679 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 RPS6KC1Q96S38 1066 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 GPR27Q9NS67 375 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 COLQQ9Y215 455 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 CDY1Q9Y6F8 540 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 CCL22O00626 93 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 CD19P15391 556 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 MATKP42679 507 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 KIR2DL1P43626 348 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 TERF1P54274 439 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 SLC6A3Q01959 620 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 GALNT2Q10471 571 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 ZNF77Q15935 545 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 GOLGA7BQ2TAP0 167 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 MESP1Q9BRJ9 268 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 TNKS2Q9H2K2 1166 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 PRKAG3Q9UGI9 489 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 JRKLQ9Y4A0 524 aa5.84□□□□□ -1.47
TOPBP1-201ENST00000260810 LOC285095A0A1B0GVY8 99 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 CYB561D2O14569 222 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 MYCNP04198 464 aaPredicted RBP5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 CYTH1Q15438 398 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 DLG2Q15700 870 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 SFMBT2Q5VUG0 894 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 BSPRYQ5W0U4 402 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 BEND5Q7L4P6 421 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 OTOP3Q7RTS5 596 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 FAM131BQ86XD5 332 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 ACAP3Q96P50 834 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 AGAP2Q99490 1192 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 DEF6Q9H4E7 631 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 GMPR2Q9P2T1 348 aaKnown RBP5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 KLF15Q9UIH9 416 aa5.84□□□□□ -1.48
TOPBP1-201ENST00000260810 SCML2Q9UQR0 700 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms