RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SLC13A5Q86YT5 568 aaPredicted RBP13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 HAS1Q92839 578 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 LPPQ93052 612 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 ZNF669Q96BR6 464 aaPredicted RBP13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 PGAP2Q9UHJ9 254 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 SPECC1L-ADORA2AF8WAN1 911 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 KRT6AP02538 564 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 KRT6BP04259 564 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 MMEP08473 750 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 KRT6CP48668 564 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 RPP38P78345 283 aaKnown RBP13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 ZCCHC8Q6NZY4 707 aaKnown RBP13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 GLT6D1Q7Z4J2 308 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 FAM131BQ86XD5 332 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 IL31RAQ8NI17 732 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 CDH19Q9H159 772 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 SEMA6BQ9H3T3 888 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 TRMT13Q9NUP7 481 aaKnown RBP13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 RNF112Q9ULX5 631 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 COLEC10Q9Y6Z7 277 aa13.73□□□□□ -0.21
PRPF38A-201ENST00000257181 FAM237AA0A1B0GTK4 181 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 GLRA3O75311 464 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 NUDT1P36639 197 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 MATKP42679 507 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 ZACNQ401N2 412 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PHF13Q86YI8 300 aaPredicted RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 HNRNPABQ99729 332 aaKnown RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 ZNF670Q9BS34 389 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 MIR1-1HGQ9H1L0 117 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 HHATLQ9HCP6 504 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 WHRNQ9P202 907 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 CTNNAL1Q9UBT7 734 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 SPTLC1O15269 473 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 ERN1O75460 977 aaKnown RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 DDHD2O94830 711 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 AGTP01019 485 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 TSHRP16473 764 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PCK1P35558 622 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 AP1S1P61966 158 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 TRIP4Q15650 581 aaPredicted RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PARP6Q2NL67 630 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PCYOX1LQ8NBM8 494 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 CFAP61Q8NHU2 1237 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 C1orf54Q8WWF1 131 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PRCCQ92733 491 aaPredicted RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 TADA1Q96BN2 335 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PRICKLE1Q96MT3 831 aaPredicted RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 NMRAL1Q9HBL8 299 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 MRPS33Q9Y291 106 aaKnown RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PCDHGC5Q9Y5F6 944 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 ZBTB14O43829 449 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 CYP1A1P04798 512 aaPredicted RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 MAGEA11P43364 429 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 UBXN2BQ14CS0 331 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 INSCQ1MX18 579 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 VARS2Q5ST30 1063 aaKnown RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 POLNQ7Z5Q5 900 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 DENND1CQ8IV53 801 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 NPLOC4Q8TAT6 608 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 FZD8Q9H461 694 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 FANCFQ9NPI8 374 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 VPS45Q9NRW7 570 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 BLOC1S4Q9NUP1 217 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 GID8Q9NWU2 228 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 FOXN1O15353 648 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 LMNAP02545 664 aaKnown RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PIM1P11309 404 aaPredicted RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 DGKGP49619 791 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 MARSP56192 900 aaKnown RBP13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 MORN1Q5T089 497 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PHYKPLQ8IUZ5 450 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 OSBPL1AQ9BXW6 950 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 MAGEH1Q9H213 219 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 PSME2Q9UL46 239 aa13.72□□□□□ -0.21
PRPF38A-201ENST00000257181 SLC38A8A6NNN8 435 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 ACSL3O95573 720 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 CCDC130P13994 396 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 STMN1P16949 149 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 HLA-DPA1P20036 260 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 RGS1Q08116 209 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 ESRP1Q6NXG1 681 aaKnown RBP13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 CHST9Q7L1S5 443 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 POP5Q969H6 163 aaKnown RBP13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 RAB11FIP5Q9BXF6 653 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 PCDH9Q9HC56 1237 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 TAS2R13Q9NYV9 303 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 NCDNQ9UBB6 729 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 RIPK3Q9Y572 518 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 EVPLLA8MZ36 301 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 CYBAP13498 195 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 RHOQP17081 205 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 NCF2P19878 526 aaPredicted RBP13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 NDUFS1P28331 727 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 PTPN9P43378 593 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 GNGT1P63211 74 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 AASDHQ4L235 1098 aaPredicted RBP13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 TPGS1Q6ZTW0 290 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 TPCN2Q8NHX9 752 aa13.71□□□□□ -0.21
PRPF38A-201ENST00000257181 CMTM5Q96DZ9 223 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms