RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 SLC30A5Q8TAD4 765 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 HMGB4Q8WW32 186 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 MYEOVQ96EZ4 313 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 LMLNQ96KR4 655 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 TPSD1Q9BZJ3 242 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 TKTL2Q9H0I9 626 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 TSPY26PQ9H489 355 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 WDCPQ9H6R7 721 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 HS3ST4Q9Y661 456 aa13.2□□□□□ -0.3
VPREB3-201ENST00000248948 C2CD4BA6NLJ0 364 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 H0Y626 953 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 ENDOD1O94919 500 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 EPN2O95208 641 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 DLDP09622 509 aaKnown RBP13.19□□□□□ -0.3
VPREB3-201ENST00000248948 TFE3P19532 575 aaPredicted RBP13.19□□□□□ -0.3
VPREB3-201ENST00000248948 P2RY2P41231 377 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 LMAN2Q12907 356 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 ELF2Q15723 593 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
VPREB3-201ENST00000248948 MBLAC2Q68D91 279 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 DNAJC24Q6P3W2 148 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 SERPINA13PQ6UXR4 307 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 CFAP52Q8N1V2 620 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 CARNMT1Q8N4J0 409 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 EMC1Q8N766 993 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 KDM1BQ8NB78 822 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 SYN2Q92777 582 aaPredicted RBP13.19□□□□□ -0.3
VPREB3-201ENST00000248948 VCPIP1Q96JH7 1222 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 CFAP57Q96MR6 1250 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 RPRD1AQ96P16 312 aaPredicted RBP13.19□□□□□ -0.3
VPREB3-201ENST00000248948 SELENOOQ9BVL4 669 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 FBRSQ9HAH7 460 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 KIAA1522Q9P206 1035 aaPredicted RBP13.19□□□□□ -0.3
VPREB3-201ENST00000248948 STIM2Q9P246 746 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 PCDHGA5Q9Y5G8 931 aa13.19□□□□□ -0.3
VPREB3-201ENST00000248948 PTPRZ1P23471 2315 aaPredicted RBP13.18□□□□□ -0.3
VPREB3-201ENST00000248948 TCRBV5S1A1TA0A578 114 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 FAM170AA1A519 330 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 ANKRD62A6NC57 917 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 SYNCRIPO60506 623 aaKnown RBP13.18□□□□□ -0.3
VPREB3-201ENST00000248948 FOXD2O60548 495 aaPredicted RBP13.18□□□□□ -0.3
VPREB3-201ENST00000248948 ZNF217O75362 1048 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 RHOBTB1O94844 696 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 MOCS3O95396 460 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 C7P10643 843 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 KRT3P12035 628 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
VPREB3-201ENST00000248948 NDUFV2P19404 249 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 PRKCHP24723 683 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 WASP42768 502 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 KLHL30Q0D2K2 578 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 AUHQ13825 339 aaKnown RBP13.18□□□□□ -0.3
VPREB3-201ENST00000248948 PTPRNQ16849 979 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 PLK5Q496M5 336 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 PITRM1Q5JRX3 1037 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 PMS2CLQ68D20 193 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 ACAD10Q6JQN1 1059 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 KIAA1211LQ6NV74 962 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 FBXL22Q6P050 247 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 KBTBD6Q86V97 674 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 CCAR2Q8N163 923 aaKnown RBP13.18□□□□□ -0.3
VPREB3-201ENST00000248948 RXFP2Q8WXD0 754 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 TTC17Q96AE7 1141 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 C1orf74Q96LT6 269 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 HAPLN3Q96S86 360 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 TMEM245Q9H330 911 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 HAUS4Q9H6D7 363 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 IFNKQ9P0W0 207 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 VANGL2Q9ULK5 521 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 PLA2G4CQ9UP65 541 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 RAD54BQ9Y620 910 aa13.18□□□□□ -0.3
VPREB3-201ENST00000248948 BZW2Q9Y6E2 419 aaKnown RBP13.18□□□□□ -0.3
VPREB3-201ENST00000248948 DMXL1Q9Y485 3027 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 IGLV3-10A0A075B6K4 115 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 SIGLEC16A6NMB1 481 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 I6L893 689 aaPredicted RBP13.17□□□□□ -0.3
VPREB3-201ENST00000248948 CBFA2T2O43439 604 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 CLDN11O75508 207 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 ADCY5O95622 1261 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 GYPCP04921 128 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 SRPRAP08240 638 aaKnown RBP13.17□□□□□ -0.3
VPREB3-201ENST00000248948 GZMAP12544 262 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 PDGFRAP16234 1089 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 DESP17661 470 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 TNFAIP3P21580 790 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 GPD1P21695 349 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 CSKP41240 450 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 PLK1P53350 603 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 CDH4P55283 916 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 ZBED6P86452 979 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 NRG1Q02297 640 aaPredicted RBP13.17□□□□□ -0.3
VPREB3-201ENST00000248948 CAMK2GQ13555 558 aaPredicted RBP13.17□□□□□ -0.3
VPREB3-201ENST00000248948 TRIM14Q14142 442 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 LPAL2Q16609 132 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 MAP7D1Q3KQU3 841 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 PLEKHG6Q3KR16 790 aa13.17□□□□□ -0.3
VPREB3-201ENST00000248948 ARL13BQ3SXY8 428 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms