RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 HDAC11Q96DB2 347 aa17.28■□□□□ 0.36
TVP23C-201ENST00000225576 SPATA13Q96N96 652 aa17.28■□□□□ 0.36
TVP23C-201ENST00000225576 RAB6BQ9NRW1 208 aa17.28■□□□□ 0.36
TVP23C-201ENST00000225576 PPARGC1AQ9UBK2 798 aaKnown RBP17.28■□□□□ 0.36
TVP23C-201ENST00000225576 UXTQ9UBK9 157 aaPredicted RBP17.28■□□□□ 0.36
TVP23C-201ENST00000225576 RWDD3Q9Y3V2 267 aa17.28■□□□□ 0.36
TVP23C-201ENST00000225576 IRAK3Q9Y616 596 aa17.28■□□□□ 0.36
TVP23C-201ENST00000225576 ALOX15BO15296 676 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 OPHN1O60890 802 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 RNF40O75150 1001 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 MAGEA4P43358 317 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 ARL4CP56559 192 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 MS4A13Q5J8X5 152 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 ANKRD20A2Q5SQ80 823 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 ANKRD20A1Q5TYW2 823 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 ANKRD20A3Q5VUR7 823 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 NUGGCQ68CJ6 796 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 PPP1R21Q6ZMI0 780 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 DNAJB7Q7Z6W7 309 aaPredicted RBP17.27■□□□□ 0.36
TVP23C-201ENST00000225576 C14orf80Q86SX3 495 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 CROCCP2Q86T23 111 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 ITIH5Q86UX2 942 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 TP53INP2Q8IXH6 220 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 ZNF683Q8IZ20 524 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 OR2W6PQ8NHA6 318 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 PSMG2Q969U7 264 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 LBHD1Q9BQE6 289 aaPredicted RBP17.27■□□□□ 0.36
TVP23C-201ENST00000225576 TMEM109Q9BVC6 243 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 FRMD8Q9BZ67 464 aaPredicted RBP17.27■□□□□ 0.36
TVP23C-201ENST00000225576 ETNK1Q9HBU6 452 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 DNAJC17Q9NVM6 304 aaKnown RBP17.27■□□□□ 0.36
TVP23C-201ENST00000225576 DONSONQ9NYP3 566 aa17.27■□□□□ 0.36
TVP23C-201ENST00000225576 IGLV3-10A0A075B6K4 115 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 TCRBV7S3A2A0A539 114 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 GOLGA6L10A6NI86 522 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 TMEM63AO94886 807 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 FDFT1P37268 417 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 GARSP41250 739 aaKnown RBP17.26■□□□□ 0.35
TVP23C-201ENST00000225576 COG7P83436 770 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 IFFO1Q0D2I5 559 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 WASHC5Q12768 1159 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 AUHQ13825 339 aaKnown RBP17.26■□□□□ 0.35
TVP23C-201ENST00000225576 HIF1AQ16665 826 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 KYNUQ16719 465 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 LILRA6Q6PI73 481 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 LRRC31Q6UY01 552 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 ARHGEF18Q6ZSZ5 1173 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 TMC7Q7Z402 723 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 RTL3Q8N8U3 475 aaKnown RBP17.26■□□□□ 0.35
TVP23C-201ENST00000225576 EXOC4Q96A65 974 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 TTC25Q96NG3 672 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 KLHL5Q96PQ7 755 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 TMBIM4Q9HC24 238 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 SAYSD1Q9NPB0 183 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 NINJ2Q9NZG7 142 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 ASB3Q9Y575 518 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 KIAA1671Q9BY89 1806 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.26■□□□□ 0.35
TVP23C-201ENST00000225576 LCHNA4D1U4 455 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 E7ESA3 106 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 RNF103O00237 685 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 COCHO43405 550 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 TGM5O43548 720 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 METTL18O95568 372 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 ADH1AP07327 375 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 MYZAPP0CAP1 466 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 SEMA5AQ13591 1074 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 LRRC49Q8IUZ0 686 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 PDIK1LQ8N165 341 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 TAB3Q8N5C8 712 aaPredicted RBP17.26■□□□□ 0.35
TVP23C-201ENST00000225576 NETO2Q8NC67 525 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 MCUQ8NE86 351 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 ARL8AQ96BM9 186 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 TSGA13Q96PP4 275 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 PRMT1Q99873 361 aaKnown RBP17.26■□□□□ 0.35
TVP23C-201ENST00000225576 EMILIN2Q9BXX0 1053 aa17.26■□□□□ 0.35
TVP23C-201ENST00000225576 ZMYND8Q9ULU4 1186 aaPredicted RBP17.26■□□□□ 0.35
TVP23C-201ENST00000225576 ZNF638Q14966 1978 aaKnown RBP17.26■□□□□ 0.35
TVP23C-201ENST00000225576 DRGXA6NNA5 263 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 GOLGA8MH3BSY2 632 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 SHBGP04278 402 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 ABHD2P08910 425 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 RHOQP17081 205 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 TPSB2P20231 275 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 CA8P35219 290 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 CTNNB1P35222 781 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 UBE3AQ05086 875 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 PDIA2Q13087 525 aaKnown RBP17.25■□□□□ 0.35
TVP23C-201ENST00000225576 TPSAB1Q15661 275 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 PABPC1LQ4VXU2 614 aaKnown RBP17.25■□□□□ 0.35
TVP23C-201ENST00000225576 UBAP2Q5T6F2 1119 aaKnown RBP17.25■□□□□ 0.35
TVP23C-201ENST00000225576 AFMIDQ63HM1 303 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 CCDC149Q6ZUS6 474 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 NLRP14Q86W24 1093 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 ARHGAP12Q8IWW6 846 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 VAT1Q99536 393 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 TCF25Q9BQ70 676 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 ROPN1BQ9BZX4 212 aaPredicted RBP17.25■□□□□ 0.35
TVP23C-201ENST00000225576 ZYG11BQ9C0D3 744 aa17.25■□□□□ 0.35
TVP23C-201ENST00000225576 NACA2Q9H009 215 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms