RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CLCNKBP51801 687 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 TMPRSS15P98073 1019 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 DEUP1Q05D60 604 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 KPNB1Q14974 876 aaKnown RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 ANO7Q6IWH7 933 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 AGMOQ6ZNB7 445 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 DENND5BQ6ZUT9 1274 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 ALYREFQ86V81 257 aaKnown RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 LPPQ93052 612 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 ZIC5Q96T25 663 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 FAM167BQ9BTA0 163 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 AGO3Q9H9G7 860 aaKnown RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 CRTAC1Q9NQ79 661 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 XPNPEP3Q9NQH7 507 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 KRT82Q9NSB4 513 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 SDAD1Q9NVU7 687 aaKnown RBP eCLIP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 MIOSQ9NXC5 875 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 ZNF638Q14966 1978 aaKnown RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 MYO18AQ92614 2054 aaKnown RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 PPP1R12AO14974 1030 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 BIRC5O15392 142 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 BEST1O76090 585 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 RAB27AP51159 221 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 AFF1P51825 1210 aaKnown RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 TKTL1P51854 596 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 CACNB2Q08289 660 aaPredicted RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 BMPR2Q13873 1038 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 TRIM68Q6AZZ1 485 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 CAPRIN2Q6IMN6 1127 aaKnown RBP22.8■■□□□ 1.24
CCDC9-201ENST00000221922 TIFABQ6ZNK6 161 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 MICAL1Q8TDZ2 1067 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 ZNF333Q96JL9 665 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 SYT15Q9BQS2 421 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 SLC13A1Q9BZW2 595 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 MFHAS1Q9Y4C4 1052 aa22.8■■□□□ 1.24
CCDC9-201ENST00000221922 ZNF623O75123 536 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 SNNO75324 88 aaPredicted RBP22.79■■□□□ 1.24
CCDC9-201ENST00000221922 VHLP40337 213 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 RAP1GDS1P52306 607 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 MAP3K7CLP57077 242 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 TRIM32Q13049 653 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 PAFAH1B3Q15102 231 aaKnown RBP22.79■■□□□ 1.24
CCDC9-201ENST00000221922 RCN1Q15293 331 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 CHI3L2Q15782 390 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 TRMT10BQ6PF06 316 aaKnown RBP22.79■■□□□ 1.24
CCDC9-201ENST00000221922 NUDCD3Q8IVD9 361 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 CCDC33Q8N5R6 958 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 LGMNQ99538 433 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 ARMCX1Q9P291 453 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 CACNG4Q9UBN1 327 aa22.79■■□□□ 1.24
CCDC9-201ENST00000221922 NVLO15381 856 aaKnown RBP22.78■■□□□ 1.24
CCDC9-201ENST00000221922 PSMG1O95456 288 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 ATP5BP06576 529 aaKnown RBP22.78■■□□□ 1.24
CCDC9-201ENST00000221922 ASGR1P07306 291 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 CNTFP26441 200 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 SCNN1GP51170 649 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 PRKCZQ05513 592 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 STEAP4Q687X5 459 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 PDZD4Q76G19 769 aaPredicted RBP22.78■■□□□ 1.24
CCDC9-201ENST00000221922 CCNJLQ8IV13 435 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 LMNTD2Q8IXW0 634 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 ARHGAP24Q8N264 748 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 COLGALT1Q8NBJ5 622 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 KLHDC9Q8NEP7 349 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 WDR60Q8WVS4 1066 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 NTAN1Q96AB6 310 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 SPDL1Q96EA4 605 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 OSBPL1AQ9BXW6 950 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 WWP1Q9H0M0 922 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 NMRK1Q9NWW6 199 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 MOCS1Q9NZB8 636 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 ZFATQ9P243 1243 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 RNF103O00237 685 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 EEF2KO00418 725 aaKnown RBP22.78■■□□□ 1.24
CCDC9-201ENST00000221922 CAPN9O14815 690 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 MAGEC1O60732 1142 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 ALDH1A1P00352 501 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 BPGMP07738 259 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 CST5P28325 142 aaPredicted RBP22.78■■□□□ 1.24
CCDC9-201ENST00000221922 NDUFV1P49821 464 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 PITX1P78337 314 aaPredicted RBP22.78■■□□□ 1.24
CCDC9-201ENST00000221922 AP1B1Q10567 949 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 NME3Q13232 169 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 LRRC8BQ6P9F7 803 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 TMPRSS6Q8IU80 811 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 ARID3BQ8IVW6 561 aaPredicted RBP22.78■■□□□ 1.24
CCDC9-201ENST00000221922 MPP5Q8N3R9 675 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 C3orf58Q8NDZ4 430 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 CNGB3Q9NQW8 809 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 CDH9Q9ULB4 789 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 PADI3Q9ULW8 664 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 RAD54BQ9Y620 910 aa22.78■■□□□ 1.24
CCDC9-201ENST00000221922 SYNJ2BP-COX16A0A087WUM0 186 aa22.77■■□□□ 1.24
CCDC9-201ENST00000221922 C9IYK1 514 aa22.77■■□□□ 1.24
CCDC9-201ENST00000221922 CREB3O43889 395 aa22.77■■□□□ 1.24
CCDC9-201ENST00000221922 KRT36O76013 467 aa22.77■■□□□ 1.24
CCDC9-201ENST00000221922 THPOP40225 353 aa22.77■■□□□ 1.24
CCDC9-201ENST00000221922 DAOAP59103 153 aa22.77■■□□□ 1.24
CCDC9-201ENST00000221922 SLC34A1Q06495 639 aa22.77■■□□□ 1.24
CCDC9-201ENST00000221922 DPYSQ14117 519 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms