RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 ERCC2P18074 760 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 SLC8A3P57103 927 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 CERCAMQ5T4B2 595 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 GPRIN1Q7Z2K8 1008 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 ZNF669Q96BR6 464 aaPredicted RBP15.02□□□□□ -0.01
CNOT3-201ENST00000221232 CELF6Q96J87 481 aaKnown RBP15.02□□□□□ -0.01
CNOT3-201ENST00000221232 OLFM3Q96PB7 478 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 TTC1Q99614 292 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 OSBPL1AQ9BXW6 950 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 DUSP16Q9BY84 665 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 CPSF2Q9P2I0 782 aaKnown RBP15.02□□□□□ -0.01
CNOT3-201ENST00000221232 LRRC42Q9Y546 428 aa15.02□□□□□ -0.01
CNOT3-201ENST00000221232 RBM47A0AV96 593 aaKnown RBP15.01□□□□□ -0.01
CNOT3-201ENST00000221232 SPECC1L-ADORA2AF8WAN1 911 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 PSMG1O95456 288 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 NCAM1P13591 858 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 NCF2P19878 526 aaPredicted RBP15.01□□□□□ -0.01
CNOT3-201ENST00000221232 ACADSBP45954 432 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 SERPINB9P50453 376 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 CACNA2D1P54289 1103 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 ITGA9Q13797 1035 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 KRT72Q14CN4 511 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 HSP90AA5PQ58FG0 334 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 LRRC8BQ6P9F7 803 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 STRADAQ7RTN6 431 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 PLD6Q8N2A8 252 aaKnown RBP15.01□□□□□ -0.01
CNOT3-201ENST00000221232 ENDOVQ8N8Q3 282 aaKnown RBP15.01□□□□□ -0.01
CNOT3-201ENST00000221232 MAB21L3Q8N8X9 362 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 HIPK4Q8NE63 616 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 SCG3Q8WXD2 468 aaKnown RBP15.01□□□□□ -0.01
CNOT3-201ENST00000221232 LPPQ93052 612 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 MFSD3Q96ES6 412 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 TNIP3Q96KP6 325 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 HSFY1Q96LI6 401 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 UNKQ9C0B0 810 aaKnown RBP15.01□□□□□ -0.01
CNOT3-201ENST00000221232 ABHD16BQ9H3Z7 469 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 KRT82Q9NSB4 513 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 THAP1Q9NVV9 213 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 CPA4Q9UI42 421 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 DERAQ9Y315 318 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 ARHGAP42A6NI28 874 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 CAPN14A8MX76 684 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 NVLO15381 856 aaKnown RBP15.01□□□□□ -0.01
CNOT3-201ENST00000221232 ARRB2P32121 409 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 FDFT1P37268 417 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 USP4Q13107 963 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 KDELC2Q7Z4H8 507 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 EMID1Q96A84 441 aaPredicted RBP15.01□□□□□ -0.01
CNOT3-201ENST00000221232 CYP4F11Q9HBI6 524 aa15.01□□□□□ -0.01
CNOT3-201ENST00000221232 MYBPHLA2RUH7 354 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 RRN3P2A6NIE6 340 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 XPO1O14980 1071 aaKnown RBP15□□□□□ -0.01
CNOT3-201ENST00000221232 ZBTB24O43167 697 aaPredicted RBP15□□□□□ -0.01
CNOT3-201ENST00000221232 FGF3P11487 239 aaPredicted RBP15□□□□□ -0.01
CNOT3-201ENST00000221232 YBX3P16989 372 aaKnown RBP eCLIP15□□□□□ -0.016e-10■■□□□ 13.4
CNOT3-201ENST00000221232 NPR3P17342 541 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 EML3Q32P44 896 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 UBXN11Q5T124 520 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 TEDDM1Q5T9Z0 273 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 ANO7Q6IWH7 933 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 CLEC20AQ6ZU45 233 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15□□□□□ -0.017e-6■■■■□ 20.7
CNOT3-201ENST00000221232 ACVR1CQ8NER5 493 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 UCMAQ8WVF2 138 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 MS4A4AQ96JQ5 239 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 ZNF560Q96MR9 790 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 SLC24A3Q9HC58 644 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 TMEM30AQ9NV96 361 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 DDX43Q9NXZ2 648 aaKnown RBP15□□□□□ -0.01
CNOT3-201ENST00000221232 MORF4L1Q9UBU8 362 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 STRNO43815 780 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 PLIN3O60664 434 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 HNRNPCL1O60812 293 aaKnown RBP15□□□□□ -0.01
CNOT3-201ENST00000221232 SNNO75324 88 aaPredicted RBP15□□□□□ -0.01
CNOT3-201ENST00000221232 NOS2P35228 1153 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 IRF9Q00978 393 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 MFSD10Q14728 455 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 PDK1Q15118 436 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 RALGPS1Q5JS13 557 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 LDLRAD1Q5T700 205 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 OLFML2BQ68BL8 750 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 MBLAC2Q68D91 279 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 STRA8Q7Z7C7 330 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 WDR75Q8IWA0 830 aaKnown RBP15□□□□□ -0.01
CNOT3-201ENST00000221232 DDX51Q8N8A6 666 aaKnown RBP eCLIP15□□□□□ -0.01
CNOT3-201ENST00000221232 SMG8Q8ND04 991 aaKnown RBP15□□□□□ -0.01
CNOT3-201ENST00000221232 ATP2A3Q93084 1043 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 DDIT4Q9NX09 232 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 STOML1Q9UBI4 398 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 PACSIN3Q9UKS6 424 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 NRCAMQ92823 1304 aa15□□□□□ -0.01
CNOT3-201ENST00000221232 USP1O94782 785 aa14.99□□□□□ -0.01
CNOT3-201ENST00000221232 FYNP06241 537 aa14.99□□□□□ -0.01
CNOT3-201ENST00000221232 SRGAP2BP0DMP2 458 aa14.99□□□□□ -0.01
CNOT3-201ENST00000221232 PGAM1P18669 254 aa14.99□□□□□ -0.01
CNOT3-201ENST00000221232 PEX19P40855 299 aa14.99□□□□□ -0.01
CNOT3-201ENST00000221232 NUMBP49757 651 aa14.99□□□□□ -0.01
CNOT3-201ENST00000221232 CCNG1P51959 295 aa14.99□□□□□ -0.01
CNOT3-201ENST00000221232 EPHB1P54762 984 aa14.99□□□□□ -0.01
CNOT3-201ENST00000221232 NIPAL4Q0D2K0 466 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms