RNA–Protein interactions for RNA: ENST00000214869.6

TMED1-201, Transcript of transmembrane p24 trafficking protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED1, Length 1,340 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-201ENST00000214869 PARD6BQ9BYG5 372 aa16.2■□□□□ 0.18
TMED1-201ENST00000214869 KLC2Q9H0B6 622 aa16.2■□□□□ 0.18
TMED1-201ENST00000214869 BRD8Q9H0E9 1235 aa16.2■□□□□ 0.18
TMED1-201ENST00000214869 RAB17Q9H0T7 212 aa16.2■□□□□ 0.18
TMED1-201ENST00000214869 EPC1Q9H2F5 836 aa16.2■□□□□ 0.18
TMED1-201ENST00000214869 PRRC2BQ5JSZ5 2229 aaKnown RBP16.2■□□□□ 0.18
TMED1-201ENST00000214869 CFAP69A5D8W1 941 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 GFRA2O00451 464 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 SOX1O00570 391 aaPredicted RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 NCAM2O15394 837 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 MFSD11O43934 449 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 TCF3P15923 654 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 TACR2P21452 398 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 CORO1AP31146 461 aaKnown RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 STIP1P31948 543 aaKnown RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 SERPINB6P35237 376 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 SLC7A5Q01650 507 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 PDK1Q15118 436 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 SLC5A9Q2M3M2 681 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 ADGRF1Q5T601 910 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 AFMIDQ63HM1 303 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 FBXL22Q6P050 247 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 HTR3DQ70Z44 454 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 GRASPQ7Z6J2 395 aaPredicted RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 NLRP14Q86W24 1093 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 DDX42Q86XP3 938 aaKnown RBP eCLIP16.19■□□□□ 0.18
TMED1-201ENST00000214869 IFT20Q8IY31 132 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 RTL3Q8N8U3 475 aaKnown RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 MAB21L3Q8N8X9 362 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 RTP4Q96DX8 246 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 QKIQ96PU8 341 aaKnown RBP eCLIP16.19■□□□□ 0.18
TMED1-201ENST00000214869 FAM118BQ9BPY3 351 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 ZYG11BQ9C0D3 744 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 TMEM248Q9NWD8 314 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 ZNF212Q9UDV6 495 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 AGO1Q9UL18 857 aaKnown RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 ZNF148Q9UQR1 794 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 ZNF510Q9Y2H8 683 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 MFHAS1Q9Y4C4 1052 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 HEY1Q9Y5J3 304 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 CPQQ9Y646 472 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 GLP2RO95838 553 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 CKMP06732 381 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 SRGAP2BP0DMP2 458 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 GGCXP38435 758 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 MRPS25P82663 173 aaKnown RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 ZXDBP98169 803 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 RBM10P98175 930 aaKnown RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 ZNF33AQ06730 810 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 GALNT2Q10471 571 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 TEAD2Q15562 447 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 SLC45A4Q5BKX6 768 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 TCEAL5Q5H9L2 206 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 GPR158Q5T848 1215 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 ZNF697Q5TEC3 545 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 RAP1GAP2Q684P5 730 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 GPR149Q86SP6 731 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 CHSY1Q86X52 802 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 DENND1CQ8IV53 801 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 CDKL3Q8IVW4 592 aaPredicted RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 CMTM8Q8IZV2 173 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 UMODL1-AS1Q8N2C9 162 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 KIAA1958Q8N8K9 716 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 CCHCR1Q8TD31 782 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 WBP2Q969T9 261 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 USP29Q9HBJ7 922 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 VANGL2Q9ULK5 521 aa16.19■□□□□ 0.18
TMED1-201ENST00000214869 UTP11Q9Y3A2 253 aaKnown RBP16.19■□□□□ 0.18
TMED1-201ENST00000214869 SHROOM3Q8TF72 1996 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 F5H5T6 163 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 GJA1P17302 382 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 HOXB8P17481 243 aaPredicted RBP16.18■□□□□ 0.18
TMED1-201ENST00000214869 MX2P20592 715 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 SLC6A4P31645 630 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 NTHL1P78549 312 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 GUCY2DQ02846 1103 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 ADAM15Q13444 863 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 CUL1Q13616 776 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 COL19A1Q14993 1142 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 BRD3Q15059 726 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 PRKD1Q15139 912 aaPredicted RBP16.18■□□□□ 0.18
TMED1-201ENST00000214869 STXBP5Q5T5C0 1151 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 RWDD4Q6NW29 188 aaKnown RBP16.18■□□□□ 0.18
TMED1-201ENST00000214869 DARS2Q6PI48 645 aaKnown RBP16.18■□□□□ 0.18
TMED1-201ENST00000214869 LRRC49Q8IUZ0 686 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 NPWQ8N729 165 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 C12orf76Q8N812 135 aaPredicted RBP16.18■□□□□ 0.18
TMED1-201ENST00000214869 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.18■□□□□ 0.18
TMED1-201ENST00000214869 ANKRD7Q92527 254 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 IGSF8Q969P0 613 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 TRIM51Q9BSJ1 452 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 FAM129AQ9BZQ8 928 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 PIDD1Q9HB75 910 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 PCDH9Q9HC56 1237 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 EPB41L5Q9HCM4 733 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 SMPD4Q9NXE4 827 aa16.18■□□□□ 0.18
TMED1-201ENST00000214869 LSM7Q9UK45 103 aaKnown RBP16.18■□□□□ 0.18
TMED1-201ENST00000214869 NYNRINQ9P2P1 1898 aaKnown RBP16.17■□□□□ 0.18
TMED1-201ENST00000214869 GOLGA6L7A0A1B0GV03 622 aa16.17■□□□□ 0.18
TMED1-201ENST00000214869 E2F8A0AVK6 867 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms