RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZDHHC7Q9NXF8 308 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 GGA3Q9NZ52 723 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 SORCS3Q9UPU3 1222 aa14.4□□□□□ -0.1
USH1C-201ENST00000005226 PTPRFP10586 1907 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.39□□□□□ -0.11
USH1C-201ENST00000005226 C19orf81C9J6K1 198 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 RNF103O00237 685 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 MFSD11O43934 449 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 ALDH1A2O94788 518 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 HSPA4LO95757 839 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 LTFP02788 710 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 P4HA1P13674 534 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 ARF4P18085 180 aaPredicted RBP14.39□□□□□ -0.11
USH1C-201ENST00000005226 SAT1P21673 171 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 PKNOX1P55347 436 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 ZNF280AP59817 542 aaPredicted RBP14.39□□□□□ -0.11
USH1C-201ENST00000005226 APBB2Q92870 758 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 USP13Q92995 863 aaPredicted RBP14.39□□□□□ -0.11
USH1C-201ENST00000005226 CMTM5Q96DZ9 223 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 KIF12Q96FN5 646 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 DNAJC1Q96KC8 554 aaKnown RBP14.39□□□□□ -0.11
USH1C-201ENST00000005226 FAM167AQ96KS9 214 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 MARK4Q96L34 752 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 PDGFCQ9NRA1 345 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 SNX15Q9NRS6 342 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 UBAP1Q9NZ09 502 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 ZNF112Q9UJU3 913 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 RPS6KL1Q9Y6S9 549 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 KCNK1O00180 336 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 DPYSL4O14531 572 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 MDM4O15151 490 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 CHRNGP07510 517 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 CCDC130P13994 396 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 ALDH1A3P47895 512 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 CBLBQ13191 982 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 Q3C1V9 767 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 UGT2A3Q6UWM9 527 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 EGFL6Q8IUX8 553 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 CHST13Q8NET6 341 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 OR52K1Q8NGK4 314 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 SLC35F5Q8WV83 523 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 CDKL2Q92772 493 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 TBCBQ99426 244 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 DNAJC28Q9NX36 388 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 TXNDC16Q9P2K2 825 aa14.39□□□□□ -0.11
USH1C-201ENST00000005226 A0A0A0MRY4 1105 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 STX16-NPEPL1H3BU86 382 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 NUDT2P50583 147 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 EN1Q05925 392 aaPredicted RBP14.38□□□□□ -0.11
USH1C-201ENST00000005226 BTKQ06187 659 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 INCA1Q0VD86 236 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 PPP2R5DQ14738 602 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 STEAP4Q687X5 459 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 KBTBD6Q86V97 674 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 OR6B3Q8NGW1 331 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 B4GALNT2Q8NHY0 566 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 PPP1R13LQ8WUF5 828 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 EZH1Q92800 747 aaPredicted RBP14.38□□□□□ -0.11
USH1C-201ENST00000005226 P2RY11Q96G91 374 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 SPATA13Q96N96 652 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 APOL2Q9BQE5 337 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 SLC4A5Q9BY07 1137 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 DTNAQ9Y4J8 743 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 SOCS7O14512 581 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 MPSTP25325 297 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 EPHA3P29320 983 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 MRPS22P82650 360 aaKnown RBP14.38□□□□□ -0.11
USH1C-201ENST00000005226 RBP5P82980 135 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 DPYSL2Q16555 572 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.38□□□□□ -0.11
USH1C-201ENST00000005226 GLRA4Q5JXX5 417 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 TMEM198Q66K66 360 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 TMC7Q7Z402 723 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 TMEM110Q86TL2 294 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 SPATA24Q86W54 205 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 ARHGAP18Q8N392 663 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 NME8Q8N427 588 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 ICA1LQ8NDH6 482 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 AKT3Q9Y243 479 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 SSX2IPQ9Y2D8 614 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 TBC1D30Q9Y2I9 924 aa14.38□□□□□ -0.11
USH1C-201ENST00000005226 C15orf38-AP3S2A0A0A6YYH1 394 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 CREB3O43889 395 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 ATP6V1B1P15313 513 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 EDNRBP24530 442 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 CNTFP26441 200 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 PMLP29590 882 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 ATICP31939 592 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 HARS2P49590 506 aaKnown RBP14.37□□□□□ -0.11
USH1C-201ENST00000005226 CHN2P52757 468 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 LSAMPQ13449 338 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 ITGA7Q13683 1181 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 ANKRD20A4Q4UJ75 823 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 PKDCCQ504Y2 493 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 CELF3Q5SZQ8 465 aaKnown RBP14.37□□□□□ -0.11
USH1C-201ENST00000005226 LRRC8BQ6P9F7 803 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 IYDQ6PHW0 289 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 ARHGAP22Q7Z5H3 698 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 ARPINQ7Z6K5 226 aa14.37□□□□□ -0.11
USH1C-201ENST00000005226 STRA8Q7Z7C7 330 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms