RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 HOXB8P17481 243 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 TPH1P17752 444 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 MATKP42679 507 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 MARSP56192 900 aaKnown RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 GPR158Q5T848 1215 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 PATL1Q86TB9 770 aaKnown RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 CPA6Q8N4T0 437 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 PIK3R5Q8WYR1 880 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 C11orf84Q9BUA3 381 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 MRPL46Q9H2W6 279 aaKnown RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 FAM124BQ9H5Z6 455 aaPredicted RBP10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 SLC24A2Q9UI40 661 aa10.59□□□□□ -0.71
NIPAL3-201ENST00000003912 DNALI1O14645 258 aaPredicted RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 TPBGLP0DKB5 382 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 RARAP10276 462 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 CTSEP14091 401 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 RFC1P35251 1148 aaPredicted RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 AIF1P55008 147 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 PPP1R26Q5T8A7 1209 aaPredicted RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 C16orf89Q6UX73 402 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 STK40Q8N2I9 435 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 ZNF384Q8TF68 577 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 CMTM5Q96DZ9 223 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 PAFAH2Q99487 392 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 NLNQ9BYT8 704 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 VPS51Q9UID3 782 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 ZNF112Q9UJU3 913 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 ENO1P06733 434 aaKnown RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 KDSRQ06136 332 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 KCNMB4Q86W47 210 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 TDRD5Q8NAT2 981 aaKnown RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 TNIP2Q8NFZ5 429 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 RSPH1Q8WYR4 309 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 BSNDQ8WZ55 320 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 FAM136AQ96C01 138 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 NEUROG2Q9H2A3 272 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 ECT2Q9H8V3 914 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 GOLGA2P5Q9HBQ8 144 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 TAS2R13Q9NYV9 303 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 ARHGAP26Q9UNA1 814 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 RAD54BQ9Y620 910 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 VGLL3A8MV65 326 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 PDE2AO00408 941 aaPredicted RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 SPATA31D3P0C874 917 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 SERPINH1P50454 418 aaKnown RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 SULT2A1Q06520 285 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 DNAL1Q4LDG9 190 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 SPATA31D4Q6ZUB0 917 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 SLC22A9Q8IVM8 553 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 SH2D3CQ8N5H7 860 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 DBF4BQ8NFT6 615 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 PIP4K2CQ8TBX8 421 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 GRIN3AQ8TCU5 1115 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 AHCYL2Q96HN2 611 aaKnown RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 SERAC1Q96JX3 654 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 FAM111AQ96PZ2 611 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 GMLQ99445 158 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 RBBP8Q99708 897 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 RGS18Q9NS28 235 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 TEKT2Q9UIF3 430 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 CLUHO75153 1309 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 MPOP05164 745 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 TLE2Q04725 743 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 CNTN1Q12860 1018 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 CSHL1Q14406 222 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 GRB14Q14449 540 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 PDCD2Q16342 344 aaPredicted RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 GRTP1Q5TC63 336 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 MAB21L3Q8N8X9 362 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 C12orf29Q8N999 325 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 DACT3Q96B18 629 aaPredicted RBP10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 ZFP42Q96MM3 310 aa10.58□□□□□ -0.72
NIPAL3-201ENST00000003912 ARL5CA6NH57 179 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 H3BMM5 538 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 BTKQ06187 659 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MIIPQ5JXC2 388 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 CXorf38Q8TB03 319 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 SPATA20Q8TB22 786 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MCOLN3Q8TDD5 553 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 TUBGCP3Q96CW5 907 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 NAF1Q96HR8 494 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 RIPOR3Q96MK2 946 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 SNRNP25Q9BV90 132 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 NID2Q14112 1375 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 HNRNPCL2B2RXH8 293 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 CES1P23141 567 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 SP100P23497 879 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MAPK9P45984 424 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 NOMO3P69849 1222 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 TBX2Q13207 712 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 BOP1Q14137 746 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 KBTBD12Q3ZCT8 623 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 INTS6LQ5JSJ4 861 aaKnown RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 RASIP1Q5U651 963 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 DOK6Q6PKX4 331 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 GET4Q7L5D6 327 aaPredicted RBP10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MYCBPAPQ8TBZ2 947 aa10.57□□□□□ -0.72
NIPAL3-201ENST00000003912 MLPHQ9BV36 600 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms