RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Il17rbQ9JIP3 499 aa26.49■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gm5483B2RV77 97 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 C6E9Q6D8 931 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Vmn2r67K7N6T2 851 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Cd247P24161 164 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 YwhaqP68254 245 aaKnown RBP26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Znf821Q6PD05 413 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Nlrp4bQ8C6J9 863 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Atg14Q8CDJ3 492 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Rxfp2Q91ZZ5 737 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 SgshQ9EQ08 502 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 CenpkQ9ESN5 271 aa26.48■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Acot8P58137 320 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ripk2P58801 539 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 StilQ60988 1262 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Nab1Q61122 486 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Cntn2Q61330 1040 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Thnsl1Q8BH55 747 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 NaprtQ8CC86 538 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Caap1Q8VDY9 356 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Mrpl9Q99N94 265 aaKnown RBP26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Pin4Q9CWW6 131 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Polr3hQ9D2C6 204 aaKnown RBP26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Plod1Q9R0E2 728 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 M1apQ9Z0E1 529 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Htr2cP34968 459 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Sdr16c6Q05A13 316 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Znf800Q0VEE6 662 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Afg1lQ3V384 480 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 CpQ61147 1061 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Abcg2Q7TMS5 657 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 SnphQ80U23 495 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Usp43Q8BUM9 1132 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Prr33Q8C494 260 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Mfsd14bQ8CIA9 507 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Reep3Q99KK1 254 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Fbxo32Q9CPU7 355 aa26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gys1Q9Z1E4 738 aaKnown RBP26.47■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Gm5415E9PXF3 478 aa26.46■■□□□ 1.83
Tpm1-216ENSMUST00000113707 BC024978J3QPC3 361 aa26.46■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Ccdc33Q3ULW6 985 aa26.46■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Lsmem1Q3UQS2 128 aa26.46■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Trpm8Q8R4D5 1104 aa26.46■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Clec4aQ9QZ15 238 aa26.46■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Sept5Q9Z2Q6 369 aa26.46■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Sh3pxd2bA2AAY5 908 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Rhox3cA2AWM0 215 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Vmn2r72D3Z4N8 856 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Grip2G3XA20 1042 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Rhox3hL7MU37 215 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Aldh1a1P24549 501 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Slc6a13P31649 602 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Rhox3aQ4TU90 215 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Cpa4Q6P8K8 420 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Xylt1Q811B1 953 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Kctd13Q8BGV7 329 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Trpa1Q8BLA8 1125 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 CgasQ8C6L5 507 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Rmi1Q9D4G9 616 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Neu2Q9JMH3 379 aa26.45■■□□□ 1.83
Tpm1-216ENSMUST00000113707 Kcng1A2BDX4 514 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Vmn2r27D3YUK6 857 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gfra2O08842 464 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 ChkaO54804 453 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Inpp5jP59644 1003 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 PrlrQ08501 608 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 KrtdapQ3V2T4 102 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Fbxo39Q5NBU5 443 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Rtl3Q6P1Y1 553 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Slc9a7Q8BLV3 726 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Neu4Q8BZL1 478 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Fbxl13Q8CDU4 790 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Cplx3Q8R1B5 158 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Lysmd3Q99LE3 305 aa26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Orc3Q9JK30 715 aaKnown RBP26.45■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gm29554A0A087WNW4 188 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Skint6A7XUZ6 1240 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gm42641I6L9G2 585 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Klc1O88447 541 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Scrg1O88745 98 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Itm2bO89051 266 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ptger1P35375 405 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Rpl10aP53026 217 aaKnown RBP26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gpr142Q7TQN9 365 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Olfr1128Q7TR47 311 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gtf2a2Q80ZM7 109 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 AtripQ8BMG1 785 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Znf76Q8BMU0 568 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Heatr3Q8BQM4 679 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Asb14Q8C6Y6 587 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Zfp62Q8C827 914 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Gspt1Q8R050 636 aaKnown RBP26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Atpaf2Q91YY4 289 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Mfsd5Q921Y4 450 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 TrabdQ99JY4 376 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Clcn2Q9R0A1 908 aa26.44■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Zscan5bB2RTN3 468 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Akain1G3UWD5 69 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Ifi206G3UZV2 921 aa26.43■■□□□ 1.82
Tpm1-216ENSMUST00000113707 Vmn2r88L7N1W8 857 aa26.43■■□□□ 1.82
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms