RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Actl7aQ9QY84 440 aa13.71□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Map3k6Q9WTR2 1291 aa13.71□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Map2k5Q9WVS7 448 aa13.71□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Kiaa0100Q5SYL3 2234 aa13.71□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ccdc175E9PVB3 822 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Hipk4Q3V016 616 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Phactr4Q501J7 694 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cd300aQ6SJQ0 318 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Usp6nlQ80XC3 819 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Wdtc1Q80ZK9 677 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Arhgef33Q8BW86 850 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 HnmtQ91VF2 295 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Mrpl9Q99N94 265 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Slc25a11Q9CR62 314 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Fam212aQ9CX62 282 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rnf225Q9D7D1 332 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Dgcr8Q9EQM6 773 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Yme1l1O88967 715 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rhox5P52651 210 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Fam91a1Q3UVG3 837 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tspan18Q80WR1 248 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Dupd1Q8BK84 215 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 ClmnQ8C5W0 1052 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cdk9Q99J95 372 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Serbp1Q9CY58 407 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Dcp2Q9CYC6 422 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Gpr63Q9EQQ3 425 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Trpc2Q9R244 1172 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Serpinb6cW4VSP4 379 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 VegfbP49766 207 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Olfr1105Q7TR58 312 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tmem209Q8BRG8 561 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Washc5Q8C2E7 1159 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Pcdhb11Q91UZ8 797 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 GneQ91WG8 722 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 DeraQ91YP3 318 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 PirQ9D711 290 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Oma1Q9D8H7 521 aa13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rpn2Q9DBG6 631 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ice1E9Q286 2241 aaKnown RBP13.7□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Pnldc1B2RXZ1 531 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Vav1P27870 845 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 PpargP37238 505 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Mnat1P51949 309 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Stx1bP61264 288 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Adcy6Q01341 1165 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Naaladl1Q7M758 745 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Clasp2Q8BRT1 1286 aaKnown RBP13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ldlrap1Q8C142 308 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Nox1Q8CIZ9 591 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 C1qtnf12Q8R2Z0 308 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rabep2Q91WG2 554 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Grhl1Q921D9 618 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rec114Q9CWH4 259 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 CinpQ9D0V8 212 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ten1Q9D7K2 161 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Fam3aQ9D8T0 230 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Rabgef1Q9JM13 491 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ttc23lA6H6E9 458 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Smpdl3bP58242 456 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Il1rapl1P59823 695 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Pla2g4dQ50L43 825 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Far2Q7TNT2 515 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Arhgap11aQ80Y19 987 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Il17reQ8BH06 637 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Lrrc4cQ8C031 640 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Abhd8Q8R0P8 439 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Nxnl1Q8VC33 217 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Mlc1Q8VHK5 382 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Lysmd3Q99LE3 305 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ndufaf1Q9CWX2 328 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 ArskQ9D2L1 553 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cnbd2Q9D5U8 673 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cyb561d2Q9WUE3 222 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Itga9B8JK39 1036 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tex11Q14AT2 947 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 1810049J17RikQ3V2G9 153 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Cldn11Q60771 207 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Mtnr1aQ61184 353 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Srrm3Q80WV7 648 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ppp1r12bQ8BG95 976 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Adnp2Q8CHC8 1165 aaKnown RBP13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Sgip1Q8VD37 806 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Sdcbp2Q99JZ0 292 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ubxn11Q9D572 484 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Stx12Q9ER00 274 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Fut8Q9WTS2 575 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Ror1Q9Z139 937 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tcp11x2A2AEI7 503 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Gm10717D3Z1I8 228 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Olfr726E9Q8X3 321 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Hsd17b4P51660 735 aaKnown RBP13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Olfr725Q05A45 321 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 AcdQ5EE38 416 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Sp140Q6NSQ5 534 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tmc8Q7TN58 722 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Vtcn1Q7TSP5 283 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Naa25Q8BWZ3 972 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Tlk1Q8C0V0 766 aa13.69□□□□□ -0.22
Clcn3-204ENSMUST00000110301 Mfsd14bQ8CIA9 507 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 97.2 ms