RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 FBXW10Q5XX13 1052 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 PACS2Q86VP3 889 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 IRGQQ8WZA9 623 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 RNF34Q969K3 372 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 GLT1D1Q96MS3 346 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 RRN3Q9NYV6 651 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 PHTF1Q9UMS5 762 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 PCDHA11Q9Y5I1 949 aa18.39■□□□□ 0.53
PHGDH-226ENST00000641756 TRIM49D1C9J1S8 452 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 LPXNO60711 386 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 F9P00740 461 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 CXCR3P49682 368 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 SESN2P58004 480 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 SARNPP82979 210 aaKnown RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 MAP3K21Q5TCX8 1036 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 TTC39BQ5VTQ0 682 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 CASC4Q6P4E1 433 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 TRAF7Q6Q0C0 670 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 PID1Q7Z2X4 250 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 DQX1Q8TE96 717 aaKnown RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 LINC01599Q8WXQ3 324 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 ALKBH8Q96BT7 664 aaKnown RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 FERMT1Q9BQL6 677 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 ALG13Q9NP73 1137 aaKnown RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 RGS18Q9NS28 235 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 OR12D3Q9UGF7 316 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 PRKAG3Q9UGI9 489 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 ARL2BPQ9Y2Y0 163 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 NLRC5Q86WI3 1866 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 HGSO14964 777 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 YWHAHQ04917 246 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 OLIG2Q13516 323 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 BMPR2Q13873 1038 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 CLLU1OSQ5K130 101 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 SPATA2LQ8IUW3 424 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 UNC5BQ8IZJ1 945 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 CCDC63Q8NA47 563 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 RMDN2Q96LZ7 410 aa18.38■□□□□ 0.53
PHGDH-226ENST00000641756 KLHL8Q9P2G9 620 aaPredicted RBP18.38■□□□□ 0.53
PHGDH-226ENST00000641756 TM9SF1O15321 606 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 MGAT1P26572 445 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 GRIK1P39086 918 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 PARP6Q2NL67 630 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 GLB1LQ6UWU2 654 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 RGS9BPQ6ZS82 235 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 SH2D5Q6ZV89 423 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 PDZD4Q76G19 769 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-226ENST00000641756 SMC1BQ8NDV3 1235 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 STKLD1Q8NE28 680 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 ZNF75CPQ92670 426 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-226ENST00000641756 STAMBPL1Q96FJ0 436 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 FRMPD3Q5JV73 1810 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 PTPRDP23468 1912 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 LRIG2O94898 1065 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 GSTA2P09210 222 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 PTPN3P26045 913 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 EPHB2P29323 1055 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 HCAR3P49019 387 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 PGFP49763 221 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 SLC5A3P53794 718 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 MGAT5Q09328 741 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 MAPRE1Q15691 268 aaKnown RBP18.37■□□□□ 0.53
PHGDH-226ENST00000641756 TTC31Q49AM3 519 aaPredicted RBP18.37■□□□□ 0.53
PHGDH-226ENST00000641756 LRRC8BQ6P9F7 803 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 RAET1EQ8TD07 263 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 APOPT1Q96IL0 206 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 EPAS1Q99814 870 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 SQORQ9Y6N5 450 aa18.37■□□□□ 0.53
PHGDH-226ENST00000641756 FAM159BA6NKW6 160 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 TRPA1O75762 1119 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 KRT37O76014 449 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 UBOX5O94941 541 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 SNRPAP09012 282 aaKnown RBP18.36■□□□□ 0.53
PHGDH-226ENST00000641756 TYMPP19971 482 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 OR1G1P47890 313 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 NEK3P51956 506 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 CDK16Q00536 496 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 SLC18A2Q05940 514 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 SMAD1Q15797 465 aaKnown RBP18.36■□□□□ 0.53
PHGDH-226ENST00000641756 SLC39A12Q504Y0 691 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 SLC24A5Q71RS6 500 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 GRAMD1AQ96CP6 724 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 AGAP3Q96P47 875 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 FAM111AQ96PZ2 611 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 GPBP1L1Q9HC44 474 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-226ENST00000641756 EIF2B3Q9NR50 452 aaKnown RBP18.36■□□□□ 0.53
PHGDH-226ENST00000641756 ZNF180Q9UJW8 692 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 PCDHB8Q9UN66 801 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 PRG3Q9Y2Y8 225 aaPredicted RBP18.36■□□□□ 0.53
PHGDH-226ENST00000641756 STARD13Q9Y3M8 1113 aa18.36■□□□□ 0.53
PHGDH-226ENST00000641756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-226ENST00000641756 EDF1O60869 148 aaKnown RBP18.35■□□□□ 0.53
PHGDH-226ENST00000641756 SRGAP2BP0DMP2 458 aa18.35■□□□□ 0.53
PHGDH-226ENST00000641756 MLNP12872 115 aa18.35■□□□□ 0.53
PHGDH-226ENST00000641756 PPIDQ08752 370 aaKnown RBP18.35■□□□□ 0.53
PHGDH-226ENST00000641756 SCN4BQ8IWT1 228 aa18.35■□□□□ 0.53
PHGDH-226ENST00000641756 OXNAD1Q96HP4 312 aaPredicted RBP18.35■□□□□ 0.53
PHGDH-226ENST00000641756 CELF6Q96J87 481 aaKnown RBP18.35■□□□□ 0.53
PHGDH-226ENST00000641756 CAPNS2Q96L46 248 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms