RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 SESTD1Q86VW0 696 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 RASSF3Q86WH2 238 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 SLC35F5Q8WV83 523 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 ZMAT2Q96NC0 199 aaKnown RBP17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 TXNDC16Q9P2K2 825 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 KCNK1O00180 336 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 BIRC5O15392 142 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 AHCYL1O43865 530 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 STK10O94804 968 aaKnown RBP17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 MAGEA6P43360 314 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 IDH3AP50213 366 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 COPAP53621 1224 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 DLG2Q15700 870 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 DEFB107AQ8IZN7 70 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 TFB1MQ8WVM0 346 aaKnown RBP17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 IFT43Q96FT9 208 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 CAB39LQ9H9S4 337 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 SNTG2Q9NY99 539 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 SSC5DA1L4H1 1573 aa17.01■□□□□ 0.31
HNRNPU-228ENST00000640306 RNF103O00237 685 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 TXNDC9O14530 226 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 TPSB2P20231 275 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 TNFAIP2Q03169 654 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 PPP2R5DQ14738 602 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 TPSAB1Q15661 275 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 RABGAP1LQ5R372 815 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 ZNF618Q5T7W0 954 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 PDPK2PQ6A1A2 396 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 ARCQ7LC44 396 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 PPP4R1Q8TF05 950 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 SORT1Q99523 831 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 SLC4A5Q9BY07 1137 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 ELP3Q9H9T3 547 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 GOLGA8QA0A0J9YX86 632 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 GOLGA8OA6NCC3 632 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 GOLGA8NF8WBI6 632 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 GOLGA8TH3BQL2 631 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 DESP17661 470 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 AOC1P19801 751 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 LMO2P25791 158 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 PEX2P28328 305 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 RABGGTBP53611 331 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 SEMA5AQ13591 1074 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 DPYSL2Q16555 572 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 SFT2D3Q587I9 215 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 KYAT3Q6YP21 454 aaKnown RBP17■□□□□ 0.31
HNRNPU-228ENST00000640306 MOB2Q70IA6 237 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 TMEM110Q86TL2 294 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 SULF1Q8IWU6 871 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 PLD6Q8N2A8 252 aaKnown RBP17■□□□□ 0.31
HNRNPU-228ENST00000640306 CDKL2Q92772 493 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 ATP2A3Q93084 1043 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 QKIQ96PU8 341 aaKnown RBP eCLIP17■□□□□ 0.312e-10■■■■■ 33.3
HNRNPU-228ENST00000640306 MKS1Q9NXB0 559 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 CPSF2Q9P2I0 782 aaKnown RBP17■□□□□ 0.31
HNRNPU-228ENST00000640306 ADAMTS6Q9UKP5 1117 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 ITGA11Q9UKX5 1188 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 RPS6KL1Q9Y6S9 549 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
HNRNPU-228ENST00000640306 DPYSL4O14531 572 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 GLRA3O75311 464 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 ETS2P15036 469 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 SAT1P21673 171 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 MSX2P35548 267 aaPredicted RBP17■□□□□ 0.31
HNRNPU-228ENST00000640306 ATXN3P54252 364 aaPredicted RBP17■□□□□ 0.31
HNRNPU-228ENST00000640306 SARNPP82979 210 aaKnown RBP17■□□□□ 0.31
HNRNPU-228ENST00000640306 RASIP1Q5U651 963 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 FRMD7Q6ZUT3 714 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 ARNTL2Q8WYA1 636 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 SH3GL3Q99963 347 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 VRTNQ9H8Y1 702 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 S100A14Q9HCY8 104 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 ERAP1Q9NZ08 941 aa17■□□□□ 0.31
HNRNPU-228ENST00000640306 PRKCGP05129 697 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 RALBP11234 206 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 KIZQ2M2Z5 673 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 PKDCCQ504Y2 493 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 P2RY11Q96G91 374 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 APOL2Q9BQE5 337 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 TRIM4Q9C037 500 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 A0A0A0MRY4 1105 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 NEMP1O14524 444 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 BUD23O43709 281 aaKnown RBP16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 SERPINE1P05121 402 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 AQP4P55087 323 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 NIPAL4Q0D2K0 466 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 CCNIQ14094 377 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 KCTD2Q14681 263 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 EXOC8Q8IYI6 725 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 SPATA13Q96N96 652 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 AGAP2Q99490 1192 aa16.99■□□□□ 0.31
HNRNPU-228ENST00000640306 SBF1O95248 1867 aa16.98■□□□□ 0.31
HNRNPU-228ENST00000640306 CLGNO14967 610 aa16.98■□□□□ 0.31
HNRNPU-228ENST00000640306 TSPAN1O60635 241 aa16.98■□□□□ 0.31
HNRNPU-228ENST00000640306 OPHN1O60890 802 aa16.98■□□□□ 0.31
HNRNPU-228ENST00000640306 ARL4AP40617 200 aa16.98■□□□□ 0.31
HNRNPU-228ENST00000640306 IRF9Q00978 393 aa16.98■□□□□ 0.31
HNRNPU-228ENST00000640306 NME3Q13232 169 aa16.98■□□□□ 0.31
HNRNPU-228ENST00000640306 SH3D19Q5HYK7 790 aa16.98■□□□□ 0.31
HNRNPU-228ENST00000640306 DHDDSQ86SQ9 333 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms