RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 HES2Q9Y543 173 aa8.31□□□□□ -1.08
GPC3-204ENST00000631057 RAD54BQ9Y620 910 aa8.31□□□□□ -1.08
GPC3-204ENST00000631057 NUMBLQ9Y6R0 609 aa8.31□□□□□ -1.08
GPC3-204ENST00000631057 CCL15-CCL14A0A0B4J2E2 113 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 CCDC195A0A1B0GUA6 201 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 FAM237BA0A1B0GVD1 139 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 WDR27A2RRH5 827 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 HMX2A2RU54 273 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 BTBD19C9JJ37 291 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 LIN7AO14910 233 aaPredicted RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 GSC2O15499 205 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 HCRTO43612 131 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 MFSD11O43934 449 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 SNNO75324 88 aaPredicted RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 F2P00734 622 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 RARBP10826 455 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 ZNF16P17020 682 aaPredicted RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 GM2AP17900 193 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 AKAP5P24588 427 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 LMO2P25791 158 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 AP1B1Q10567 949 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 WASHC5Q12768 1159 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 STX3Q13277 289 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 PAFAH1B3Q15102 231 aaKnown RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 CCL15Q16663 113 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 TSNAXIP1Q2TAA8 658 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 MAMSTRQ6ZN01 415 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 PLEKHH3Q7Z736 793 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 ANKRD23Q86SG2 305 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 PIGZQ86VD9 579 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 ARID3BQ8IVW6 561 aaPredicted RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.3□□□□□ -1.087e-6■■■■□ 20.7
GPC3-204ENST00000631057 PYROXD2Q8N2H3 581 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 TEX9Q8N6V9 391 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 PPP1R14CQ8TAE6 165 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 TTC8Q8TAM2 541 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 SREK1Q8WXA9 508 aaKnown RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 KCTD13Q8WZ19 329 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 NT5C3BQ969T7 300 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 MECRQ9BV79 373 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 STN1Q9H668 368 aaKnown RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 XPNPEP3Q9NQH7 507 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 THAP1Q9NVV9 213 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 PPARGC1AQ9UBK2 798 aaKnown RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 HBS1LQ9Y450 684 aaKnown RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 LRRC42Q9Y546 428 aa8.3□□□□□ -1.08
GPC3-204ENST00000631057 FNDC1Q4ZHG4 1894 aaPredicted RBP8.3□□□□□ -1.08
GPC3-204ENST00000631057 TRPM7Q96QT4 1865 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 CAPN14A8MX76 684 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 EEF2KO00418 725 aaKnown RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 LILRB3O75022 631 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 FBXO21O94952 628 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 NPR3P17342 541 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 MGAT1P26572 445 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 TKTP29401 623 aaKnown RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 GARSP41250 739 aaKnown RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 GRIA1P42261 906 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 AIF1P55008 147 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 SESN2P58004 480 aaPredicted RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 IFRD2Q12894 506 aaPredicted RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 DPYSQ14117 519 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 SNX17Q15036 470 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 ZRSR2Q15696 482 aaKnown RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 INSCQ1MX18 579 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 DCAF6Q58WW2 860 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 SPANXN3Q5MJ09 141 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 FAM182AQ5T1J6 154 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 PACS1Q6VY07 963 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 RINLQ6ZS11 566 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 BNIPLQ7Z465 357 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 TTC7BQ86TV6 843 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 ALYREFQ86V81 257 aaKnown RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 OSTM1Q86WC4 334 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 RASSF3Q86WH2 238 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 SIX6OS1Q8N1H7 587 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 CCDC33Q8N5R6 958 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 PDCD7Q8N8D1 485 aaKnown RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 WNT8BQ93098 351 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 PGBD4Q96DM1 585 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 P2RY11Q96G91 374 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 PRR11Q96HE9 360 aaPredicted RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 SLC2A13Q96QE2 648 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 SLC9A7Q96T83 725 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 NPY6RQ99463 290 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 PARK7Q99497 189 aaKnown RBP8.29□□□□□ -1.08
GPC3-204ENST00000631057 LGMNQ99538 433 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 MAGEB5Q9BZ81 275 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 NMUR2Q9GZQ4 415 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 FAM96AQ9H5X1 160 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 LRRC4Q9HBW1 653 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 KLK14Q9P0G3 267 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 IGSF9Q9P2J2 1179 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 TXNDC16Q9P2K2 825 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 STOML1Q9UBI4 398 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 DCDC2Q9UHG0 476 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 GJD2Q9UKL4 321 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 ADAM28Q9UKQ2 775 aa8.29□□□□□ -1.08
GPC3-204ENST00000631057 SORCS3Q9UPU3 1222 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms