RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 GPATCH2LQ9NWQ4 482 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 HEMK1Q9Y5R4 338 aaPredicted RBP14.49□□□□□ -0.09
LDB3-209ENST00000623056 SIP14410 1827 aa14.49□□□□□ -0.09
LDB3-209ENST00000623056 YDJCA8MPS7 323 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 PRPSAP2O60256 369 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 TPSB2P20231 275 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 TGM2P21980 687 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 NIPAL4Q0D2K0 466 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 SLC10A2Q12908 348 aaPredicted RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 TPSAB1Q15661 275 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 C15orf59Q2T9L4 293 aaPredicted RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 PIGGQ5H8A4 983 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 PPM1LQ5SGD2 360 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 BNC2Q6ZN30 1099 aaPredicted RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 ZBTB33Q86T24 672 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 ERI1Q8IV48 349 aaKnown RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 DSELQ8IZU8 1212 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 KYQ8NBH2 561 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 BHLHE22Q8NFJ8 381 aaPredicted RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 KCNN1Q92952 543 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 OR52B2Q96RD2 323 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 TMEM165Q9HC07 324 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 JPH1Q9HDC5 661 aaPredicted RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 PCDHB12Q9Y5F1 795 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 CDY2AQ9Y6F7 541 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 CDY1Q9Y6F8 540 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 PRSS51A0A1B0GVH4 220 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 WDR27A2RRH5 827 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 ALDH1A2O94788 518 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 CAPNS1P04632 268 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 THRAP10827 490 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 GLDCP23378 1020 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 PIK3R1P27986 724 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 NUMBP49757 651 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 PKNOX1P55347 436 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 MS4A2Q01362 244 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 CYTH1Q15438 398 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 CDO1Q16878 200 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 DUOXA2Q1HG44 320 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 XKR3Q5GH77 459 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 STEAP4Q687X5 459 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 TRNP1Q6NT89 227 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 CYS1Q717R9 158 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 CDAN1Q8IWY9 1227 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 TSPAN14Q8NG11 270 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 GPRASP2Q96D09 838 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 CNPY3Q9BT09 278 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 HAUS8Q9BT25 410 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 GCOM2Q9BZD3 368 aaPredicted RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 XYLT2Q9H1B5 865 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 LIN28AQ9H9Z2 209 aaKnown RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 ZNF358Q9NW07 568 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 NXF1Q9UBU9 619 aaKnown RBP14.48□□□□□ -0.09
LDB3-209ENST00000623056 PSAT1Q9Y617 370 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 DOCK5Q9H7D0 1870 aa14.48□□□□□ -0.09
LDB3-209ENST00000623056 GPR25O00155 361 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 CPA3P15088 417 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 ZNF23P17027 643 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 GPD1P21695 349 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 ARL2P36404 184 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 MAGEA10P43363 369 aaPredicted RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 ACTR2P61160 394 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 TFAMQ00059 246 aaKnown RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 PLOD1Q02809 727 aaPredicted RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 TMEM62Q0P6H9 643 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 GRM1Q13255 1194 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 CEACAM7Q14002 265 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 INSCQ1MX18 579 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 METTL21CQ5VZV1 264 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 CASC4Q6P4E1 433 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 VSIG10LQ86VR7 867 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 PCDH19Q8TAB3 1148 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 RIN3Q8TB24 985 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 NLRP7Q8WX94 980 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 RXFP2Q8WXD0 754 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 TMIGD2Q96BF3 282 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 CCT7Q99832 543 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 ZNF341Q9BYN7 854 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 INO80BQ9C086 356 aaPredicted RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 SLC38A10Q9HBR0 1119 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 E2F8A0AVK6 867 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 RGSL1A5PLK6 1076 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 HSPA4LO95757 839 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 CCDC130P13994 396 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 DPEP1P16444 411 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 PSMC3P17980 439 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 MX2P20592 715 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 CCND2P30279 289 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 TCF7P36402 384 aaPredicted RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 CDK9P50750 372 aaKnown RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 ATXN3P54252 364 aaPredicted RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 CRADDP78560 199 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 CBX3Q13185 183 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 PPP6R3Q5H9R7 873 aaPredicted RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 SLC9A4Q6AI14 798 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 ABHD15Q6UXT9 468 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 CHERPQ8IWX8 916 aaKnown RBP14.47□□□□□ -0.09
LDB3-209ENST00000623056 BBS5Q8N3I7 341 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 RNF148Q8N7C7 305 aa14.47□□□□□ -0.09
LDB3-209ENST00000623056 TMEM102Q8N9M5 508 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms